Evidence map›Paper›PMID 32106653›Full record

ArticleAsian-Australasian journal of animal sciences2020

Association of the thyroid hormone responsive spot 14 alpha gene with growth-related traits in Korean native chicken.

Muhammad Cahyadi, Hee-Bok Park, Dong Won Seo, Shil Jin, Nuri Choi, Kang Nyeong Heo, Bo Seok Kang, Cheorun Jo, Jun Heon Lee

Open access · goldAbstract read
In one paragraph

Article in Asian-Australasian journal of animal sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 57% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Muhammad CahyadiDepartment of Animal Science, Faculty of Agriculture, Universitas Sebelas Maret, Surakarta 57126, Indonesia.
Hee-Bok ParkDepartment of Animal Resources Science, Kongju National University, Yesan 32439, Korea.
Dong Won SeoDepartment of Animal and Dairy Science, College of Agriculture and Life Sciences, Chungnam National University, Daejeon 34134, Korea.
Shil JinDepartment of Animal and Dairy Science, College of Agriculture and Life Sciences, Chungnam National University, Daejeon 34134, Korea.
Nuri ChoiDivision of Biotechnology, College of Environmental and Bioresource Sciences, Chonbuk National University, Iksan 54596, Korea.
Kang Nyeong HeoPoultry Research Institute, National Institute of Animal Science, RDA, Pyeongchang 25340, Korea.
Bo Seok KangPoultry Research Institute, National Institute of Animal Science, RDA, Pyeongchang 25340, Korea.
Cheorun JoDepartment of Agricultural Biotechnology and Research Institute of Agriculture and Life Science, Seoul National University, Seoul 151921, Korea.
Jun Heon LeeDepartment of Animal and Dairy Science, College of Agriculture and Life Sciences, Chungnam National University, Daejeon 34134, Korea.
Chungnam National University · KRNational Institute of Animal Science · KRJeonbuk National University · KRKongju National University · KRSebelas Maret University · IDSeoul National University · KR

Funding

Korea Institute of Planning and Evaluation for Technology in Food, Agriculture, Forestry and FisheriesMinistry of Agriculture, Food and Rural Affairs 213010-05-4-SB250Rural Development Administration
6 · The paper itself

Abstract

objectiveThyroid hormone responsive spot 14 alpha (THRSP) has been used to investigate the regulation of de novo lipogenesis because the variation of THRSP mRNA content in the tissue affects directly the ability of that tissue to synthetize lipids. Also, this gene responds to thyroid hormone stimulation and high level of carbohydrate feeding or insulin-injection. This study was carried out to investigate variations within THRSP and their effects on body and carcass weights in Korean native chicken (KNC).

methodsA total of 585 chickens which represent the five lines of KNC (Black, Gray-Brown, Red-Brown, White, and Yellow-Brown) were reared and body weight data were recorded every two weeks from hatch until 20 weeks of age. Polymerase chain reaction- restriction fragment length polymorphism, DNA chips for Agilent 2100 Bioanalyzer, and Fluidigm Genotyping Technology, were applied to genotype selected markers. A linear mixed-effect model was used to access association between these single nucleotide polymorphism (SNP) markers and growth-related traits.

resultsA total of 30 polymorphisms were investigated in THRSP. Of these, nine SNPs for loci were selected to perform association analyses. Significant associations were detected between g.-49G>T SNP with body weight at 20 weeks of age (BW20), g.451T>C SNP with growth at 10 to 12 weeks of age (GR10-12), and g.1432A>C SNP with growth at 14 to 16 weeks trait (GR14-16) and body weight at 18 weeks of age (BW18). Moreover, diplotype of the THRSP gene significantly affected body weight at 12 weeks of age (BW12) and GR10-12 traits. Diplotype of ht1/ht2 was favorable for BW12 and GR10-12 traits.

conclusionThese results suggest that THRSP can be regarded as a candidate gene for growth traits in KNC.

Indexed as

AssociationBody WeightGrowthKorean Native ChickenThyroid Hormone Responsive Spot 14 Alpha Gene

Identifiers

PMID32106653
PMCPMC7649070
OpenAlexW3007037135

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.