Evidence map›Paper›PMID 32105410›Full record

ArticleFEBS open bio2020

Role of miRNA-542-5p in the tumorigenesis of osteosarcoma.

Tengjiao Zhu, Daoyang Fan, Kaifeng Ye, Bingchuan Liu, Zhiyong Cui, Zhongjun Liu, Yun Tian

Open access · goldAbstract read
In one paragraph

Article in FEBS open bio, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Tengjiao ZhuDepartment of Orthopedic, Third Hospital of Peking University, Beijing, China.
Daoyang FanDepartment of Orthopedic, Third Hospital of Peking University, Beijing, China.
Kaifeng YeDepartment of Orthopedic, Third Hospital of Peking University, Beijing, China.
Bingchuan LiuDepartment of Orthopedic, Third Hospital of Peking University, Beijing, China.
Zhiyong CuiDepartment of Orthopedic, Third Hospital of Peking University, Beijing, China.
Zhongjun LiuDepartment of Orthopedic, Third Hospital of Peking University, Beijing, China.
Yun TianDepartment of Orthopedic, Third Hospital of Peking University, Beijing, China.ORCID 0000-0003-2310-6054
Peking University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Osteosarcoma, one of the most common malignant bone tumors, is characterized by a high rate of metastasis, and the survival rate of patients with metastatic osteosarcoma is poor. Previous studies have reported that miRNAs often regulate the occurrence and development of various tumors. In this work, we identified miRNA-542-5p as a critical miRNA in osteosarcoma by overlapping three Gene Expression Omnibus datasets, and then evaluated miRNA-542-5p expression profiles using Gene Expression Omnibus and Sarcoma-microRNA Expression Database. We used MISIM to investigate miRNAs correlated with miR-542 and identified potential target genes of miRNA-542-5p using miRWalk. Functional and pathway enrichment analyses were performed using The Database for Annotation, Visualization and Integrated Discovery. Protein-protein interaction was performed using Search Tool for the Retrieval of Interacting Genes and Cytoscape. We report that the relative level of miRNA-542-5p was significantly higher in osteosarcoma than in healthy bone. Expressions of hsa-miR-330 and hsa-miR-1202 were found to be strongly correlated with that of miR-542-5p. Furthermore, we identified a total of 514 down-regulated genes as possible targets of miR-542-5p. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analysis demonstrated that the putative target genes of miR-542-5p were most enriched in the cell-cycle process. The differentially expressed genes CDCA5, PARP12 and HSPD1 were found to be hub genes in protein-protein interaction networks. Finally, transfection of the osteosarcoma cell line U2OS with miR-542-5p mimics or inhibitor revealed that miR-542-5p can promote cell proliferation. In conclusion, our results suggest that miR-542-5p may promote osteosarcoma proliferation; thus, this miRNA may have potential as a biomarker for diagnosis and prognosis.

Indexed as

Gene Expression Regulation, NeoplasticBiomarkers, TumorBone NeoplasmsCarcinogenesisCell Line, TumorCell ProliferationDatabases, GeneticGene Regulatory NetworksHumansMicroRNAsOsteosarcomaPrognosisProtein Interaction MapsSignal TransductionTranscriptomeTransfectionBiomarkers, TumorMicroRNAsMIRN1202 microRNA, humanMIRN330 microRNA, humanMIRN542 microRNA, humanbioinformaticsbiomarkermiRNAmiRNA-542-5posteosarcoma

Identifiers

PMID32105410
PMCPMC7137799
OpenAlexW3008351891

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.