Evidence map›Paper›PMID 32105288›Full record

ArticleGenetics and molecular biology2020

Novel insights into chromosome evolution of Charadriiformes: extensive genomic reshuffling in the wattled jacana (Jacana jacana, Charadriiformes, Jacanidae).

Rafael Kretschmer, Marcelo Santos de Souza, Suziane Alves Barcellos, Tiago Marafiga Degrandi, Jorge C Pereira, Patricia C M O'Brien, Malcolm A Ferguson-Smith, Ricardo José Gunski, Analía Del Valle Garnero, Edivaldo Herculano Correa de Oliveira and 1 more

Open access · goldAbstract read
In one paragraph

Article in Genetics and molecular biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Rafael KretschmerUniversidade Federal do Rio Grande do Sul, Programa de Pós-graduação em Genética e Biologia Molecular - PPGBM, Porto Alegre, Rio Grande do Sul, RS, Brazil.ORCID http://orcid.org/0000-0002-6856-2152
Marcelo Santos de SouzaUniversidade Federal do Pampa, Programa de Pós-graduação em Ciências Biológicas - PPGCB, São Gabriel, Rio Grande do Sul, RS, Brazil.ORCID http://orcid.org/0000-0002-2130-6100
Suziane Alves BarcellosUniversidade Federal do Pampa, Programa de Pós-graduação em Ciências Biológicas - PPGCB, São Gabriel, Rio Grande do Sul, RS, Brazil.ORCID http://orcid.org/0000-0003-2863-9976
Tiago Marafiga DegrandiUniversidade Federal do Paraná, Laboratório de Citogenética e Genética da Conservação Animal, Programa de Pós-graduação em Genética, Curitiba, PR, Brazil.ORCID http://orcid.org/0000-0003-1586-5405
Jorge C PereiraUniversity of Cambridge, Department of Veterinary Medicine, Cambridge Resource Centre for Comparative Genomics, Cambridge, United Kingdom.
Patricia C M O'BrienUniversity of Cambridge, Department of Veterinary Medicine, Cambridge Resource Centre for Comparative Genomics, Cambridge, United Kingdom.
Malcolm A Ferguson-SmithUniversity of Cambridge, Department of Veterinary Medicine, Cambridge Resource Centre for Comparative Genomics, Cambridge, United Kingdom.
Ricardo José GunskiUniversidade Federal do Pampa, Programa de Pós-graduação em Ciências Biológicas - PPGCB, São Gabriel, Rio Grande do Sul, RS, Brazil.ORCID http://orcid.org/0000-0002-7315-0590
Analía Del Valle GarneroUniversidade Federal do Pampa, Programa de Pós-graduação em Ciências Biológicas - PPGCB, São Gabriel, Rio Grande do Sul, RS, Brazil.ORCID http://orcid.org/0000-0003-4252-8228
Edivaldo Herculano Correa de OliveiraUniversidade Federal do Pará, Instituto de Ciências Exatas e Naturais, Belém, PA, Brazil.ORCID http://orcid.org/0000-0001-6315-3352
Thales Renato Ochotorena de FreitasUniversidade Federal do Rio Grande do Sul, Programa de Pós-graduação em Genética e Biologia Molecular - PPGBM, Porto Alegre, Rio Grande do Sul, RS, Brazil.ORCID http://orcid.org/0000-0002-1019-9303
Universidade Federal do Pampa · BRUniversity of Cambridge · GBUniversidade Federal do Rio Grande do Sul · BRInstituto Evandro Chagas · BRUniversidade Federal do Paraná · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The order Charadriiformes comprises three major clades: Lari and Scolopaci as sister group to Charadrii. Until now, only three Charadriiformes species have been studied by chromosome painting: Larus argentatus (Lari), Burhinus oedicnemus and Vanellus chilensis (Charadrii). Hence, there is a lack of information concerning the third clade, Scolapaci. Based on this, and to gain a better understanding of karyotype evolution in the order Charadriiformes, we applied conventional and molecular cytogenetic approaches in a species belonging to clade Scolopaci - the wattled jacana (Jacana jacana) - using Gallus gallus and Zenaida auriculata chromosome-specific probes. Cross-species evaluation of J. jacana chromosomes shows extensive genomic reshuffling within macrochromosomes during evolution, with multiple fission and fusion events, although the diploid number remains at high level (2n=82). Interestingly, this species does not have the GGA7-8 fusion, which was found in two representatives of Charadrii clade, reinforcing the idea that this fusion may be exclusive to the Charadrii clade. In addition, it is shown that the chromosome evolution in Charadriiformes is complex and resulted in species with typical and atypical karyotypes. The karyotypic features of Scolopaci are very different from those of Charadrii and Lari, indicating that after divergence, each suborder has undergone different chromosome rearrangements.

Identifiers

PMID32105288
PMCPMC7198006
OpenAlexW3007085552

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.