Evidence map›Paper›PMID 32104227›Full record

ArticleExperimental and therapeutic medicine2020

Systematic prediction of the biological functions of TAS2R10 using positive co-expression analysis.

Hongling Zhu, Lianyong Liu, Li Ren, Junhua Ma, Shuanggang Hu, Zhaohui Zhu, Xuemei Zhao, Chao Shi, Xing Wang, Chaobao Zhang and 2 more

Open access · diamondAbstract read
In one paragraph

Article in Experimental and therapeutic medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Hongling ZhuDepartment of Endocrinology, Shanghai Gongli Hospital, The Second Military Medical University, Shanghai 200135, P.R. China.
Lianyong LiuDepartment of Endocrinology, Punan Hospital of Pudong New District, Shanghai 200125, P.R. China.
Li RenDepartment of Endocrinology, Shanghai Gongli Hospital, The Second Military Medical University, Shanghai 200135, P.R. China.
Junhua MaDepartment of Endocrinology, Shanghai Gongli Hospital, The Second Military Medical University, Shanghai 200135, P.R. China.
Shuanggang HuShanghai Key Laboratory for Assisted Reproduction and Reproductive Genetics, Center for Reproductive Medicine, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai 200135, P.R. China.
Zhaohui ZhuDepartment of Endocrinology, Shanghai Gongli Hospital, The Second Military Medical University, Shanghai 200135, P.R. China.
Xuemei ZhaoDepartment of Endocrinology, Shanghai Gongli Hospital, The Second Military Medical University, Shanghai 200135, P.R. China.
Chao ShiDepartment of Endocrinology, Shanghai Gongli Hospital, The Second Military Medical University, Shanghai 200135, P.R. China.
Xing WangDepartment of Endocrinology, Shanghai Gongli Hospital, The Second Military Medical University, Shanghai 200135, P.R. China.
Chaobao ZhangState Key Laboratory of Molecular Biology, CAS Center for Excellence in Molecular Cell Science, Shanghai Institute of Biochemistry and Cell Biology, Chinese Academy of Sciences, University of Chinese Academy of Sciences, Shanghai 200031, P.R. China.
Mingjun GuDepartment of Endocrinology, Shanghai Gongli Hospital, The Second Military Medical University, Shanghai 200135, P.R. China.
Xiangqi LiDepartment of Endocrinology, Shanghai Gongli Hospital, The Second Military Medical University, Shanghai 200135, P.R. China.
Shanghai Pudong New Area Gongli Hospital · CNSecond Military Medical University · CNCenter for Excellence in Molecular Cell Science · CNPunan Hospital · CNRenji Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Type 2 taste receptor 10 (TAS2R10), belonging to the TAS2R family of bitter receptors, is widely expressed in extra-oral tissues. However, its biological roles beyond bitterness sensing in the tongue have remained largely elusive. The present study aimed to perform a positive co-expression analysis using 60,000 Affymetrix expression arrays and 5,000 The Cancer Genome Atlas datasets to uncover such roles. Based on the functional enrichment analysis, it was indicated that in the Gene Ontology (GO) category biological process, TAS2R10 was mostly involved in 'cellular protein metabolic process', 'protein modification process', 'cellular protein modification process' and 'cellular component assembly'. In the GO category cellular component, the co-expressed genes were accumulated in 'Spt-Ada-Gcn5 acetyltransferase (SAGA)-type complex' and 'SAGA complex', and in the category molecular function, they were concentrated in 'hexosaminidase activity', 'cytoskeletal adaptor activity', 'cyclin binding' and 'β-N-acetylhexosaminidase activity'. Of note, it was indicated that TAS2R10 may be involved in 'ubiquitin-mediated proteolysis', which may provide a starting point to fully investigate the detailed functions of TAS2R10 in the future. TAS2R10 was also indicated to be associated with human diseases, i.e. 'Salmonella infection'. Overall, the present study was the first to perform a comprehensive bioinformatics analysis of the functions of TAS2R10 and provide insight regarding the notion that this gene may have crucial roles beyond bitterness sensing.

Indexed as

bitter receptorco-expression analysisdiseasefunctiontype 2 taste receptor 10

Identifiers

PMID32104227
PMCPMC7027137
OpenAlexW2997456082

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.