Evidence map›Paper›PMID 32103019›Full record

ArticleNature communications2020

The epidermis coordinates thermoresponsive growth through the phyB-PIF4-auxin pathway.

Sara Kim, Geonhee Hwang, Soohwan Kim, Thom Nguyen Thi, Hanim Kim, Jinkil Jeong, Jaewook Kim, Jungmook Kim, Giltsu Choi, Eunkyoo Oh

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
17.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 126 citations in OpenAlex.

  1. Article
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  4. Principles and mechanisms of plant acclimation to heat stress.Nature reviews. Molecular cell biology · 2026
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  10. CUL3Science advances · 2026
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10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Sara KimDepartment of Life Sciences, Korea University, Seoul, Korea.
Geonhee HwangDepartment of Life Sciences, Korea University, Seoul, Korea.
Soohwan KimDepartment of Life Sciences, Korea University, Seoul, Korea.ORCID http://orcid.org/0000-0003-4091-2728
Thom Nguyen ThiDepartment of Bioenergy Science and Technology, Chonnam National University, Gwangju, 61186, Korea.
Hanim KimDepartment of Biological Sciences, KAIST, Daejeon, Korea.
Jinkil JeongMolecular and Cell Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, 92037, USA.
Jaewook KimFaculty of Agriculture, Kyushu University, Fukuoka, 819-0395, Japan.
Jungmook KimDepartment of Bioenergy Science and Technology, Chonnam National University, Gwangju, 61186, Korea.
Giltsu ChoiDepartment of Biological Sciences, KAIST, Daejeon, Korea.
Eunkyoo OhDepartment of Life Sciences, Korea University, Seoul, Korea. ekoh@korea.ac.kr.ORCID http://orcid.org/0000-0002-7313-2448
Korea University · KRChonnam National University · KRKorea Advanced Institute of Science and Technology · KRSalk Institute for Biological Studies · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In plants, an elevation in ambient temperature induces adaptive morphological changes including elongated hypocotyls, which is predominantly regulated by a bHLH transcription factor, PIF4. Although PIF4 is expressed in all aerial tissues including the epidermis, mesophyll, and vascular bundle, its tissue-specific functions in thermomorphogenesis are not known. Here, we show that epidermis-specific expression of PIF4 induces constitutive long hypocotyls, while vasculature-specific expression of PIF4 has no effect on hypocotyl growth. RNA-Seq and qRT-PCR analyses reveal that auxin-responsive genes and growth-related genes are highly activated by epidermal, but not by vascular, PIF4. Additionally, inactivation of epidermal PIF4 or auxin signaling, and overexpression of epidermal phyB suppresses thermoresponsive growth, indicating that epidermal PIF4-auxin pathways are essential for the temperature responses. Further, we show that high temperatures increase both epidermal PIF4 transcription and the epidermal PIF4 DNA-binding ability. Taken together, our study demonstrates that the epidermis regulates thermoresponsive growth through the phyB-PIF4-auxin pathway.

Indexed as

ArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsFlowersGene Expression Regulation, PlantHot TemperatureHypocotylIndoleacetic AcidsPhytochrome BPlant EpidermisPlants, Genetically ModifiedSignal TransductionArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsIndoleacetic AcidsPHYB protein, ArabidopsisPhytochrome BPIF4 protein, Arabidopsis

Identifiers

PMID32103019
PMCPMC7044213
OpenAlexW3007276167

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.