Evidence map›Paper›PMID 32102607›Full record

ArticleOpen biology2020

Molecular anatomy of the pre-primitive-streak chick embryo.

Hyung Chul Lee, Hui-Chun Lu, Mark Turmaine, Nidia M M Oliveira, Youwen Yang, Irene De Almeida, Claudio D Stern

Open access · goldAbstract read
In one paragraph

Article in Open biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 30 citations in OpenAlex.

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  13. The embryonic node behaves as an instructive stem cell niche for axial elongation.Proceedings of the National Academy of Sciences of the United States of America · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Hyung Chul LeeDepartment of Cell and Developmental Biology, University College London, Gower Street, London WC1E 6BT, UK.
Hui-Chun LuDepartment of Cell and Developmental Biology, University College London, Gower Street, London WC1E 6BT, UK.
Mark TurmaineDepartment of Cell and Developmental Biology, University College London, Gower Street, London WC1E 6BT, UK.
Nidia M M OliveiraDepartment of Cell and Developmental Biology, University College London, Gower Street, London WC1E 6BT, UK.
Youwen YangDepartment of Cell and Developmental Biology, University College London, Gower Street, London WC1E 6BT, UK.
Irene De AlmeidaDepartment of Cell and Developmental Biology, University College London, Gower Street, London WC1E 6BT, UK.
Claudio D SternDepartment of Cell and Developmental Biology, University College London, Gower Street, London WC1E 6BT, UK.
University College London · GB

Funding

Biotechnology and Biological Sciences Research Council BB/C512753/1Biotechnology and Biological Sciences Research Council BB/G000972/1Wellcome TrustWellcome Trust 107055/Z/15/Z
6 · The paper itself

Abstract

The early stages of development of the chick embryo, leading to primitive streak formation (the start of gastrulation), have received renewed attention recently, especially for studies of the mechanisms of large-scale cell movements and those that position the primitive streak in the radial blastodisc. Over the long history of chick embryology, the terminology used to define different regions has been changing, making it difficult to relate studies to each other. To resolve this objectively requires precise definitions of the regions based on anatomical and functional criteria, along with a systematic molecular map that can be compared directly to the functional anatomy. Here, we undertake these tasks. We describe the characteristic cell morphologies (using scanning electron microscopy and immunocytochemistry for cell polarity markers) in different regions and at successive stages. RNAseq was performed for 12 regions of the blastodisc, from which a set of putative regional markers was selected. These were studied in detail by

Indexed as

Gene Regulatory NetworksAnimalsBiomarkersCell PolarityChick EmbryoGene Expression ProfilingGene Expression Regulation, DevelopmentalImmunohistochemistryIn Situ HybridizationMicroscopy, Atomic ForcePrimitive StreakSequence Analysis, RNABiomarkersavian embryosblastodermblastodisccell polaritygastrulationtranscriptomics

Identifiers

PMID32102607
PMCPMC7058932
OpenAlexW3006142156

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.