Evidence map›Paper›PMID 32101491›Full record

ArticleJournal of neurophysiology2020

A neural network for online spike classification that improves decoding accuracy.

Deepa Issar, Ryan C Williamson, Sanjeev B Khanna, Matthew A Smith

Abstract read
In one paragraph

Article in Journal of neurophysiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. A TALE OF TWO TAILS: PREFERRED AND ANTI-PREFERRED NATURAL STIMULI IN VISUAL CORTEX.... International Conference on Learning Representations · 2026
    Article
  6. Review
  7. Article
  8. Article
  9. Robustness of Working Memory to Prefrontal Cortex Microstimulation.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
  10. Article
  11. Robustness of working memory to prefrontal cortex microstimulation.bioRxiv : the preprint server for biology · 2025
    Article
  12. Brain-computer Interaction in the Smart Era.Current medical science · 2024
    Review
  13. Recent Visual Experience Reshapes V4 Neuronal Activity and Improves Perceptual Performance.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  14. Compact deep neural network models of visual cortex.bioRxiv : the preprint server for biology · 2023
    Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Deepa IssarDepartment of Bioengineering, University of Pittsburgh, Pittsburgh, Pennsylvania.ORCID 0000-0002-1378-2991
Ryan C WilliamsonUniversity of Pittsburgh School of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania.ORCID 0000-0001-9558-9513
Sanjeev B KhannaDepartment of Bioengineering, University of Pittsburgh, Pittsburgh, Pennsylvania.ORCID 0000-0002-5688-4170
Matthew A SmithDepartment of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, Pennsylvania.ORCID 0000-0003-1192-9942

Funding

Virus Production and Manipulation of Protein/Gene Expression ModuleP30EY008098 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Ethan A Rossi · 1989 to 2026
$17.8M
TRAINING PROGRAM FOR MD/PHD STUDENTST32GM008208 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI STEINMAN, RICHARD A · 1987 to 2021
$15.4M
Interdisciplinary Visual Sciences (IVS) Traininig ProgramT32EY017271 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Marlene Behrmann, Paul R. Kinchington · 2008 to 2026
$3.6M
Slow time scale fluctuations in neurons and behaviorR01MH128393 · NIMH · CARNEGIE-MELLON UNIVERSITY · PI MATTHEW A SMITH · 2022 to 2026
$2.2M
Dynamic Mechanisms of active vision in prefrontal cortexR01EY022928 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SMITH, MATTHEW A · 2014 to 2018
$1.9M
CRCNS: Modulating Neural Population Interactions between Cortical AreasR01MH118929 · NIMH · CARNEGIE-MELLON UNIVERSITY · PI SMITH, MATTHEW A, YU, BYRON M. · 2018 to 2022
$1.7M
Neuronal population dynamics within and across cortical areasR01EB026953 · NIBIB · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DOIRON, BRENT D., SMITH, MATTHEW A · 2018 to 2020
$1.0M
CRCNS: Interhemispheric coordination for memory and actionR01NS147766 · NINDS · CARNEGIE-MELLON UNIVERSITY · PI Joseph Patrick Mayo, MATTHEW A SMITH · 2025 to 2026
$750k
NEI NIH HHS P30 EY008098NEI NIH HHS R01 EY022928NEI NIH HHS T32 EY017271NIGMS NIH HHS T32 GM008208NIMH NIH HHS R01 MH118929NIMH NIH HHS R01 MH128393NINDS NIH HHS R01 NS147766
6 · The paper itself

Abstract

Separating neural signals from noise can improve brain-computer interface performance and stability. However, most algorithms for separating neural action potentials from noise are not suitable for use in real time and have shown mixed effects on decoding performance. With the goal of removing noise that impedes online decoding, we sought to automate the intuition of human spike-sorters to operate in real time with an easily tunable parameter governing the stringency with which spike waveforms are classified. We trained an artificial neural network with one hidden layer on neural waveforms that were hand-labeled as either spikes or noise. The network output was a likelihood metric for each waveform it classified, and we tuned the network's stringency by varying the minimum likelihood value for a waveform to be considered a spike. Using the network's labels to exclude noise waveforms, we decoded remembered target location during a memory-guided saccade task from electrode arrays implanted in prefrontal cortex of rhesus macaque monkeys. The network classified waveforms in real time, and its classifications were qualitatively similar to those of a human spike-sorter. Compared with decoding with threshold crossings, in most sessions we improved decoding performance by removing waveforms with low spike likelihood values. Furthermore, decoding with our network's classifications became more beneficial as time since array implantation increased. Our classifier serves as a feasible preprocessing step, with little risk of harm, that could be applied to both off-line neural data analyses and online decoding.

Indexed as

ElectrocorticographyNeural Networks, ComputerPattern Recognition, AutomatedAction PotentialsAnimalsBrain-Computer InterfacesMacaca mulattaMalePrefrontal CortexSaccadesSpatial MemoryBCIdecodingneural networkprefrontal cortexspike-sorting

Identifiers

PMID32101491
PMCPMC7191521

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.