ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2020
High-density NGS-based map construction and genetic dissection of fruit shape and rind netting in Cucumis melo.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.
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Who cites it
17 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Meta genetic analysis of melon sweetness.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Pooled it
- Introgression line libraries in melon (Molecular breeding : new strategies in plant improvement · 2026Review
- Genetic Mapping of a QTL Controlling Fruit Size in Melon (Plants (Basel, Switzerland) · 2025Article
- Mining the cucumber core collection: phenotypic and genetic characterization of morphological diversity for fruit quality characteristics.Horticulture research · 2025Article
- Beyond skin-deep: targeting the plant surface for crop improvement.Journal of experimental botany · 2023Review
- Molecular Marker-Assisted Mapping, Candidate Gene Identification, and Breeding in Melon (International journal of molecular sciences · 2023Review
- QTL Mapping and Genome-Wide Association Study Reveal Genetic Loci and Candidate Genes Related to Soluble Solids Content in Melon.Current issues in molecular biology · 2023Article
- Natural allelic variation in the EamA-like transporter, CmSN, is associated with fruit skin netting in melon.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- A Novel Introgression Line Library Derived from a Wild Melon Gives Insights into the Genetics of Melon Domestication, Uncovering New Genetic Variability Useful for Breeding.International journal of molecular sciences · 2023Article
- Genetic Mapping and QTL Analysis of Fruit Traits in Melon (Current issues in molecular biology · 2023Article
- Interspecific common bean population derived fromFrontiers in plant science · 2023Article
- Pan-genome and multi-parental framework for high-resolution trait dissection in melon (Cucumis melo).The Plant journal : for cell and molecular biology · 2022Article
- Fruit Morphology and Ripening-Related QTLs in a Newly Developed Introgression Line Collection of the Elite Varieties 'Védrantais' and 'Piel de Sapo'.Plants (Basel, Switzerland) · 2022Article
- Functional copy number variation of CsSHINE1 is associated with fruit skin netting intensity in cucumber, Cucumis sativus.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- Mapping of genetic loci controlling fruit linked morphological traits of melon using developed CAPS markers.Molecular biology reports · 2022Article
- Revealing the Genetic Components Responsible for the Unique Photosynthetic Stem Capability of the Wild AlmondFrontiers in plant science · 2021Article
- Comparative Metabolomics and Molecular Phylogenetics of Melon (Metabolites · 2020Article
Corrections and comments
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Authors and funding
12 authors.
Funding
Abstract
Melon is an important crop that exhibits broad variation for fruit morphology traits that are the substrate for genetic mapping efforts. In the post-genomic era, the link between genetic maps and physical genome assemblies is key for leveraging QTL mapping results for gene cloning and breeding purposes. Here, using a population of 164 melon recombinant inbred lines (RILs) that were subjected to genotyping-by-sequencing, we constructed and compared high-density sequence- and linkage-based recombination maps that were aligned to the reference melon genome. These analyses reveal the genome-wide variation in recombination frequency and highlight regions of disrupted collinearity between our population and the reference genome. The population was phenotyped over 3 years for fruit size and shape as well as rind netting. Four QTLs were detected for fruit size, and they act in an additive manner, while significant epistatic interaction was found between two neutral loci for this trait. Fruit shape displayed transgressive segregation that was explained by the action of four QTLs, contributed by alleles from both parents. The complexity of rind netting was demonstrated on a collection of 177 diverse accessions. Further dissection of netting in our RILs population, which is derived from a cross of smooth and densely netted parents, confirmed the intricacy of this trait and the involvement of major locus and several other interacting QTLs. A major netting QTL on chromosome 2 co-localized with results from two additional populations, paving the way for future study toward identification of a causative gene for this trait.
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