Evidence map›Paper›PMID 32098961›Full record

ArticleNature communications2020

AMPK-dependent activation of the Cyclin Y/CDK16 complex controls autophagy.

Marc Dohmen, Sarah Krieg, Georgios Agalaridis, Xiaoqing Zhu, Saifeldin N Shehata, Elisabeth Pfeiffenberger, Jan Amelang, Mareike Bütepage, Elena Buerova, Carolina M Pfaff and 7 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 40 citations in OpenAlex.

  1. Guideline
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  14. Hippo-YAP signaling pathway regulates autophagy of human periodontal ligament cells under cyclic tensile stress.Hua xi kou qiang yi xue za zhi = Huaxi kouqiang yixue zazhi = West China journal of stomatology · 2023
    Article
  15. New insights into activation and function of the AMPK.Nature reviews. Molecular cell biology · 2023
    Review
  16. The role of cyclin Y in normal and pathological cells.Cell cycle (Georgetown, Tex.) · 2023
    Review
  17. Article
  18. Discovery of 3-Amino-1International journal of molecular sciences · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 8 institutions in 5 countries.

Marc Dohmen *Institute of Biochemistry and Molecular Biology, Medical School, RWTH Aachen University, 52074, Aachen, Germany.
Sarah Krieg *Institute of Biochemistry and Molecular Biology, Medical School, RWTH Aachen University, 52074, Aachen, Germany.ORCID http://orcid.org/0000-0003-1329-0185
Georgios AgalaridisInstitute of Biochemistry and Molecular Biology, Medical School, RWTH Aachen University, 52074, Aachen, Germany.
Xiaoqing ZhuCARIM School for Cardiovascular Diseases, Maastricht University, P.O. box 616, 6200 MD, Maastricht, The Netherlands.
Saifeldin N ShehataNestlé Research, EPFL Innovation Park, 1015, Lausanne, Switzerland.
Elisabeth PfeiffenbergerDivision of Molecular Pathophysiology, Biocenter, Innsbruck Medical University, Innrain 80/82, 6020, Innsbruck, Austria.
Jan AmelangInstitute of Biochemistry and Molecular Biology, Medical School, RWTH Aachen University, 52074, Aachen, Germany.ORCID http://orcid.org/0000-0002-1884-5859
Mareike BütepageInstitute of Biochemistry and Molecular Biology, Medical School, RWTH Aachen University, 52074, Aachen, Germany.
Elena BuerovaInstitute of Biochemistry and Molecular Biology, Medical School, RWTH Aachen University, 52074, Aachen, Germany.
Carolina M PfaffInstitute of Biochemistry and Molecular Biology, Medical School, RWTH Aachen University, 52074, Aachen, Germany.
Dipanjan ChandaCARIM School for Cardiovascular Diseases, Maastricht University, P.O. box 616, 6200 MD, Maastricht, The Netherlands.
Stephan GeleyDivision of Molecular Pathophysiology, Biocenter, Innsbruck Medical University, Innrain 80/82, 6020, Innsbruck, Austria.
Christian PreisingerProteomics Facility, Interdisciplinary Center for Clinical Research (IZKF) Aachen, Medical School, RWTH Aachen University, 52074, Aachen, Germany.
Kei SakamotoNestlé Research, EPFL Innovation Park, 1015, Lausanne, Switzerland.
Bernhard LüscherInstitute of Biochemistry and Molecular Biology, Medical School, RWTH Aachen University, 52074, Aachen, Germany. luescher@rwth-aachen.de.ORCID http://orcid.org/0000-0002-9622-8709
Dietbert NeumannCARIM School for Cardiovascular Diseases, Maastricht University, P.O. box 616, 6200 MD, Maastricht, The Netherlands. d.neumann@maastrichtuniversity.nl.ORCID http://orcid.org/0000-0002-4316-684X
Jörg VervoortsInstitute of Biochemistry and Molecular Biology, Medical School, RWTH Aachen University, 52074, Aachen, Germany. jvervoorts-weber@ukaachen.de.ORCID http://orcid.org/0000-0002-3251-6496
RWTH Aachen University · DEInnsbruck Medical University · ATMaastricht University · NLAstraZeneca (Germany) · DEMaastricht University Medical Centre · NLMiltenyi Biotec (Germany) · DENestlé (Switzerland) · CHUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The AMP-activated protein kinase (AMPK) is a master sensor of the cellular energy status that is crucial for the adaptive response to limited energy availability. AMPK is implicated in the regulation of many cellular processes, including autophagy. However, the precise mechanisms by which AMPK controls these processes and the identities of relevant substrates are not fully understood. Using protein microarrays, we identify Cyclin Y as an AMPK substrate that is phosphorylated at Serine 326 (S326) both in vitro and in cells. Phosphorylation of Cyclin Y at S326 promotes its interaction with the Cyclin-dependent kinase 16 (CDK16), thereby stimulating its catalytic activity. When expressed in cells, Cyclin Y/CDK16 is sufficient to promote autophagy. Moreover, Cyclin Y/CDK16 is necessary for efficient AMPK-dependent activation of autophagy. This functional interaction is mediated by AMPK phosphorylating S326 of Cyclin Y. Collectively, we define Cyclin Y/CDK16 as downstream effector of AMPK for inducing autophagy.

Indexed as

AMP-Activated Protein KinasesAnimalsAutophagyAutophagy-Related Protein-1 HomologBeclin-1Biphenyl CompoundsCyclin-Dependent KinasesCyclinsHeLa CellsHumansIntracellular Signaling Peptides and ProteinsMiceNIH 3T3 CellsPhosphorylationProtein Array AnalysisPyrones4-hydroxy-3-(4-(2-hydroxyphenyl)phenyl)-6-oxo-7H-thieno(2,3-b)pyridine-5-carbonitrileAMP-Activated Protein KinasesAutophagy-Related Protein-1 HomologBeclin-1Biphenyl CompoundsCCNY protein, humanCDK14 protein, humanCDK15 protein, humanCyclin-Dependent KinasesCyclinsIntracellular Signaling Peptides and ProteinsPCTAIRE-1 protein kinasePyronesSerineThiophenesULK1 protein, human

Identifiers

PMID32098961
PMCPMC7042329
OpenAlexW3009004173

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.