Evidence map›Paper›PMID 32098268›Full record

ArticleSensors (Basel, Switzerland)2020

3D-Printed Modular Microfluidic Device Enabling Preconcentrating Bacteria and Purifying Bacterial DNA in Blood for Improving the Sensitivity of Molecular Diagnostics.

Abdurhaman Teyib Abafogi, Jaewon Kim, Jinyeop Lee, Merem Omer Mohammed, Danny van Noort, Sungsu Park

Open access · goldAbstract read
In one paragraph

Article in Sensors (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 4 countries.

Abdurhaman Teyib AbafogiSchool of Mechanical Engineering, Sungkyunkwan University, Suwon 16419, Korea.ORCID 0000-0001-5679-1401
Jaewon KimSchool of Mechanical Engineering, Sungkyunkwan University, Suwon 16419, Korea.
Jinyeop LeeSchool of Mechanical Engineering, Sungkyunkwan University, Suwon 16419, Korea.
Merem Omer MohammedDepartment of Biomedical Engineering, Sungkyunkwan University, Suwon 16419, Korea.ORCID 0000-0003-0456-8923
Danny van NoortDivision of Biotechnology, IFM, Linkoping University, 58183 Linkoping, Sweden.ORCID 0000-0002-0818-0443
Sungsu ParkSchool of Mechanical Engineering, Sungkyunkwan University, Suwon 16419, Korea.ORCID 0000-0003-3062-1302
Sungkyunkwan University · KRLinköping University · SE

Funding

National Research Foundation of Korea H-guard 2018M3A6B2057299
6 · The paper itself

Abstract

Molecular diagnostics for sepsis is still a challenge due to the presence of compounds that interfere with gene amplification and bacteria at concentrations lower than the limit of detection (LOD). Here, we report on the development of a 3D printed modular microfluidic device (3DpmμFD) that preconcentrates bacteria of interest in whole blood and purifies their genomic DNA (gDNA). It is composed of a W-shaped microchannel and a conical microchamber. Bacteria of interest are magnetically captured from blood in the device with antibody conjugated magnetic nanoparticles (Ab-MNPs) at 5 mL/min in the W-shaped microchannel, while purified gDNA of the preconcentrated bacteria is obtained with magnetic silica beads (MSBs) at 2 mL/min in the conical microchamber. The conical microchamber was designed to be connected to the microchannel after the capturing process using a 3D-printed rotary valve to minimize the exposure of the MSBs to interfering compounds in blood. The pretreatment process of spiked blood (2.5 mL) can be effectively completed within about 50 min. With the 3DpmμFD, the LOD for the target microorganism

Indexed as

Lab-On-A-Chip DevicesBacteriaDNA, BacterialEscherichia coliPathology, MolecularPolymerase Chain ReactionDNA, Bacterialbacterial preconcentrationDNA purificationmicrofluidic devicemolecular diagnosticspathogen

Identifiers

PMID32098268
PMCPMC7070462
OpenAlexW3006903143

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.