Evidence map›Paper›PMID 32097515›Full record

ArticleAngewandte Chemie (International ed. in English)2020

Bacterial Autoimmune Drug Metabolism Transforms an Immunomodulator into Structurally and Functionally Divergent Antibiotics.

Hyun Bong Park, Tyler N Goddard, Joonseok Oh, Jaymin Patel, Zheng Wei, Corey E Perez, Brandon Q Mercado, Rurun Wang, Thomas P Wyche, Grazia Piizzi and 2 more

Open access · greenAbstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Tapinarof for the treatment of psoriasis.Dermatologic therapy · 2022
    Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Hyun Bong ParkDepartment of Chemistry, Yale University, New Haven, CT, 06520, USA.
Tyler N GoddardDepartment of Chemistry, Yale University, New Haven, CT, 06520, USA.
Joonseok OhDepartment of Chemistry, Yale University, New Haven, CT, 06520, USA.
Jaymin PatelChemical Biology Institute, Yale University, West Haven, CT, 06516, USA.
Zheng WeiChemical Biology Institute, Yale University, West Haven, CT, 06516, USA.
Corey E PerezDepartment of Chemistry, Yale University, New Haven, CT, 06520, USA.
Brandon Q MercadoDepartment of Chemistry, Yale University, New Haven, CT, 06520, USA.
Rurun WangExploratory Science Center, Merck & Co., Inc., Cambridge, MA, USA.
Thomas P WycheExploratory Science Center, Merck & Co., Inc., Cambridge, MA, USA.
Grazia PiizziExploratory Science Center, Merck & Co., Inc., Cambridge, MA, USA.
Richard A FlavellDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT, 06520, USA.
Jason M CrawfordDepartment of Chemistry, Yale University, New Haven, CT, 06520, USA.ORCID 0000-0002-7583-1242
Yale University · USMerck & Co., Inc., Rahway, NJ, USA (United States) · USHoward Hughes Medical Institute · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Predoc Training at the Interface Chemistry and BiologyT32GM067543 · NIGMS · YALE UNIVERSITY · PI CRAWFORD, JASON MICHAEL · 2003 to 2022
$7.4M
Cryptic gut bacterial metabolites that regulate colorectal cancer formationDP2CA186575 · NCI · YALE UNIVERSITY · PI CRAWFORD, JASON MICHAEL · 2013 to 2013
$2.5M
Ecological triggers to exploit antibiotic and virulence factor regulationR00GM097096 · NIGMS · YALE UNIVERSITY · PI CRAWFORD, JASON MICHAEL · 2012 to 2014
$721k
EPA EP-W-17-011NCATS NIH HHS UL1 TR001863NCI NIH HHS DP2 CA186575NIGMS NIH HHS R00 GM097096NIGMS NIH HHS T32 GM067543
6 · The paper itself

Abstract

Tapinarof is a stilbene drug that is used to treat psoriasis and atopic dermatitis, and is thought to function through regulation of the AhR and Nrf2 signaling pathways, which have also been linked to inflammatory bowel diseases. It is produced by the gammaproteobacterial Photorhabdus genus, which thus represents a model to probe tapinarof structural and functional transformations. We show that Photorhabdus transforms tapinarof into novel drug metabolism products that kill inflammatory bacteria, and that a cupin enzyme contributes to the conversion of tapinarof and related dietary stilbenes into novel dimers. One dimer has activity against methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin-resistant Enterococcus faecalis (VRE), and another undergoes spontaneous cyclizations to a cyclopropane-bridge-containing hexacyclic framework that exhibits activity against Mycobacterium. These dimers lack efficacy in a colitis mouse model, whereas the monomer reduces disease symptoms.

Indexed as

AnimalsAnti-Bacterial AgentsAutoimmunityBiotransformationImmunologic FactorsMicePhotorhabdusResorcinolsStilbenesAnti-Bacterial AgentsImmunologic FactorsResorcinolsStilbenestapinarofantibioticsinflammationmicrobiomenatural productsstilbenes

Identifiers

PMID32097515
PMCPMC7200298
OpenAlexW3007044054

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.