Evidence map›Paper›PMID 32096861›Full record

ArticleMolecular biology and evolution2020

Evidence of Pathogen-Induced Immunogenetic Selection across the Large Geographic Range of a Wild Seabird.

Hila Levy, Steven R Fiddaman, Juliana A Vianna, Daly Noll, Gemma V Clucas, Jasmine K H Sidhu, Michael J Polito, Charles A Bost, Richard A Phillips, Sarah Crofts and 10 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular biology and evolution, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.5field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 12 institutions in 9 countries.

Hila LevyDepartment of Zoology, University of Oxford, Oxford, United Kingdom.
Steven R FiddamanDepartment of Zoology, University of Oxford, Oxford, United Kingdom.
Juliana A ViannaDepartamento de Ecosistemas y Medio Ambiente, Pontificia Universidad Católica de Chile, Macul, Santiago, Chile.
Daly NollDepartamento de Ecosistemas y Medio Ambiente, Pontificia Universidad Católica de Chile, Macul, Santiago, Chile.
Gemma V ClucasCornell Atkinson Center for a Sustainable Future, Cornell University, Ithaca, NY.
Jasmine K H SidhuDepartment of Zoology, University of Oxford, Oxford, United Kingdom.
Michael J PolitoDepartment of Oceanography and Coastal Sciences, Louisiana State University, Baton Rouge, LA.
Charles A BostCentre d'Etudes Biologiques de Chizé (CEBC), UMR 7372 du CNRS-Université de La Rochelle, Villiers-en-Bois, France.
Richard A PhillipsBritish Antarctic Survey, Cambridge, United Kingdom.
Sarah CroftsFalklands Conservation, Stanley, Falkland Islands, United Kingdom.
Gary D MillerMicrobiology and Immunology, PALM, University of Western Australia, Crawley, Western Australia, Australia.
Pierre PistoriusDST/NRF Centre of Excellence at the Percy FitzPatrick Institute for African Ornithology, Department of Zoology, Nelson Mandela University, Port Elizabeth, South Africa.
Francesco BonnadonnaCEFE UMR 5175, CNRS, Université de Montpellier, Université Paul-Valéry Montpellier, EPHE, Montpellier, France.
Céline Le BohecUniversité de Strasbourg, CNRS, IPHC UMR 7178, Strasbourg, France.
Andrés BarbosaMuseo Nacional de Ciencias Naturales, Departamento de Ecología Evolutiva, CSIC, Madrid, Spain.
Phil TrathanBritish Antarctic Survey, Cambridge, United Kingdom.
Andrea Raya ReyCentro Austral de Investigaciones Científicas - Consejo Nacional de Investigaciones Científicas y Técnicas (CADIC-CONICET), Ushuaia, Tierra del Fuego, Argentina.
Laurent A F FrantzSchool of Biological and Chemical Sciences, Queen Mary University of London, London, United Kingdom.
Tom HartDepartment of Zoology, University of Oxford, Oxford, United Kingdom.
Adrian L SmithDepartment of Zoology, University of Oxford, Oxford, United Kingdom.
University of Oxford · GBCentre National de la Recherche Scientifique · FRBritish Antarctic Survey · GBPontificia Universidad Católica de Chile · CLConsejo Nacional de Investigaciones Científicas y Técnicas · ARCornell University · USFalklands Conservation · GBLouisiana State University · USMuseo Nacional de Ciencias Naturales · ESNelson Mandela University · ZAQueen Mary University of London · GBThe University of Western Australia · AU

Funding

Biotechnology and Biological Sciences Research Council BB/M011224/1
6 · The paper itself

Abstract

Over evolutionary time, pathogen challenge shapes the immune phenotype of the host to better respond to an incipient threat. The extent and direction of this selection pressure depend on the local pathogen composition, which is in turn determined by biotic and abiotic features of the environment. However, little is known about adaptation to local pathogen threats in wild animals. The Gentoo penguin (Pygoscelis papua) is a species complex that lends itself to the study of immune adaptation because of its circumpolar distribution over a large latitudinal range, with little or no admixture between different clades. In this study, we examine the diversity in a key family of innate immune genes-the Toll-like receptors (TLRs)-across the range of the Gentoo penguin. The three TLRs that we investigated present varying levels of diversity, with TLR4 and TLR5 greatly exceeding the diversity of TLR7. We present evidence of positive selection in TLR4 and TLR5, which points to pathogen-driven adaptation to the local pathogen milieu. Finally, we demonstrate that two positively selected cosegregating sites in TLR5 are sufficient to alter the responsiveness of the receptor to its bacterial ligand, flagellin. Taken together, these results suggest that Gentoo penguins have experienced distinct pathogen-driven selection pressures in different environments, which may be important given the role of the Gentoo penguin as a sentinel species in some of the world's most rapidly changing environments.

Indexed as

Selection, GeneticAnimalsFlagellinGenetic VariationPhylogeographySpheniscidaeToll-Like ReceptorsFlagellinToll-Like ReceptorsAntarctica and Southern OceanGentoo penguinimmunogeneticspathogen-mediated selectionpositive selectionToll-like receptors

Identifiers

PMID32096861
PMCPMC7253215
OpenAlexW3005780708

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.