Evidence map›Paper›PMID 32095437›Full record

ArticleClinical and experimental vaccine research2020

Reverse vaccinology approach for the identification and characterization of outer membrane proteins of

Chiuan Yee Leow, Ada Kazi, Che Muhammad Khairul Hisyam Ismail, Candy Chuah, Boon Huat Lim, Chiuan Herng Leow, Kirnpal Kaur Banga Singh

Open access · diamondAbstract read
In one paragraph

Article in Clinical and experimental vaccine research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 35 citations in OpenAlex.

  1. Human vaccines & immunotherapeutics · 2026
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  11. Frontiers in medicine · 2022
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  12. Recent Progress inPathogens (Basel, Switzerland) · 2021
    Review
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  16. Evaluation of the Whole Proteome ofFrontiers in medicine · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Chiuan Yee LeowInstitute for Research in Molecular Medicine, Universiti Sains Malaysia, Kubang Kerian, Malaysia.ORCID https://orcid.org/0000-0002-6919-5921
Ada KaziInstitute for Research in Molecular Medicine, Universiti Sains Malaysia, Kubang Kerian, Malaysia.ORCID https://orcid.org/0000-0002-7673-6650
Che Muhammad Khairul Hisyam IsmailInstitute for Research in Molecular Medicine, Universiti Sains Malaysia, Kubang Kerian, Malaysia.ORCID https://orcid.org/0000-0002-6392-0491
Candy ChuahSchool of Medical Sciences, Universiti Sains Malaysia, Kubang Kerian, Malaysia.ORCID https://orcid.org/0000-0001-6113-5070
Boon Huat LimSchool of Health Sciences, Universiti Sains Malaysia, Kubang Kerian, Malaysia.ORCID https://orcid.org/0000-0003-3838-1526
Chiuan Herng LeowInstitute for Research in Molecular Medicine, Universiti Sains Malaysia, Gelugor, Malaysia.ORCID https://orcid.org/0000-0003-0849-428X
Kirnpal Kaur Banga SinghSchool of Medical Sciences, Universiti Sains Malaysia, Kubang Kerian, Malaysia.ORCID https://orcid.org/0000-0002-9958-5760
Universiti Sains Malaysia · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeIn the developing world, bacillary dysentery is one of the most common communicable diarrheal infections. There are approximately 169 million cases of shigellosis reported worldwide. The disease is transmitted by a group of Gram-negative intracellular enterobacteria known as MATERIALS AND

methodsIn this study, a reverse vaccinology approach was employed to identify most conserved and immunogenic outer membrane proteins (OMPs) of

resultsFive OMPs including fepA, ompC, nlpD_1, tolC, and nlpD_2 were identified as potential vaccine candidates. Protein-protein interactions analysis using STRING software (https://string-db.org/) revealed that five of these OMPs may potentially interact with other intracellular proteins which are involved in beta-lactam resistance pathway. B- and T-cell epitopes of the selected OMPs were predicted using BCPred as well as Propred I and Propred (http://crdd.osdd.net/raghava/propred/), respectively. Each of these OMPs contains regions which are capable to induce B- and T-cell immune responses.

conclusionAnalysis acquired from this study showed that five selected OMPs have great potential for vaccine development against

Indexed as

AntigensBacterial outer membrane proteinBioinformaticsShigella flexneriVaccines

Identifiers

PMID32095437
PMCPMC7024733
OpenAlexW3005954936

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.