Evidence map›Paper›PMID 32094185›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Intrinsically disordered protein RBM14 plays a role in generation of RNA:DNA hybrids at double-strand break sites.

Yumi Jang, Zeinab Elsayed, Rebeka Eki, Shuaixin He, Kang-Ping Du, Tarek Abbas, Mihoko Kai

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 38 citations in OpenAlex.

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  18. DNA Double-Strand Breaks as Pathogenic Lesions in Neurological Disorders.International journal of molecular sciences · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Yumi JangDepartment of Radiation Oncology, Johns Hopkins University School of Medicine, Baltimore, MD 21231.
Zeinab ElsayedDepartment of Radiation Oncology, Johns Hopkins University School of Medicine, Baltimore, MD 21231.
Rebeka EkiDepartment of Radiation Oncology, University of Virginia School of Medicine, Charlottesville, VA 22908.
Shuaixin HeBiophysics and Biophysical Chemistry, Johns Hopkins University School of Medicine, Baltimore, MD 21231.
Kang-Ping DuDepartment of Radiation Oncology, University of Virginia School of Medicine, Charlottesville, VA 22908.
Tarek AbbasDepartment of Radiation Oncology, University of Virginia School of Medicine, Charlottesville, VA 22908.
Mihoko KaiDepartment of Radiation Oncology, Johns Hopkins University School of Medicine, Baltimore, MD 21231; mkai2@jhmi.edu.
University of Virginia · USJohns Hopkins Medicine · USJohns Hopkins University · US

Funding

Cancer Research Training Program: From Molecular Mechanisms to Therapeutic StrategiesT32CA009109 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI Andrew Carl Dudley, Melanie R Rutkowski · 1985 to 2026
$13.9M
Role of the checkpoint clamp in double-strand break repairR01GM113253 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI KAI, MIHOKO · 2015 to 2019
$1.6M
NCI NIH HHS T32 CA009109NIGMS NIH HHS R01 GM113253
6 · The paper itself

Abstract

Accumulating evidence suggests participation of RNA-binding proteins with intrinsically disordered domains (IDPs) in the DNA damage response (DDR). These IDPs form liquid compartments at DNA damage sites in a poly(ADP ribose) (PAR)-dependent manner. However, it is greatly unknown how the IDPs are involved in DDR. We have shown previously that one of the IDPs RBM14 is required for the canonical nonhomologous end joining (cNHEJ). Here we show that RBM14 is recruited to DNA damage sites in a PARP- and RNA polymerase II (RNAPII)-dependent manner. Both KU and RBM14 are required for RNAPII-dependent generation of RNA:DNA hybrids at DNA damage sites. In fact, RBM14 binds to RNA:DNA hybrids. Furthermore, RNA:DNA hybrids and RNAPII are detected at gene-coding as well as at intergenic areas when double-strand breaks (DSBs) are induced. We propose that the cNHEJ pathway utilizes damage-induced transcription and intrinsically disordered protein RBM14 for efficient repair of DSBs.

Indexed as

DNA Breaks, Double-StrandedDNA End-Joining RepairChimeraHEK293 CellsHumansIntracellular Signaling Peptides and ProteinsIntrinsically Disordered ProteinsKu AutoantigenNucleic Acid HybridizationProtein DomainsRNARNA-Binding ProteinsRNA Polymerase IIIntracellular Signaling Peptides and ProteinsIntrinsically Disordered ProteinsKu AutoantigenRBM14 protein, humanRNARNA-Binding ProteinsRNA Polymerase IIDNA repairdouble-strand breaksRBM14

Identifiers

PMID32094185
PMCPMC7071921
OpenAlexW3008326210

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.