Evidence map›Paper›PMID 32092218›Full record

ArticleChemphyschem : a European journal of chemical physics and physical chemistry2020

The Photocatalyzed Thiol-ene reaction: A New Tag to Yield Fast, Selective and reversible Paramagnetic Tagging of Proteins.

Maxime Denis, Charlotte Softley, Stefano Giuntini, Matteo Gentili, Enrico Ravera, Giacomo Parigi, Marco Fragai, Grzegorz Popowicz, Michael Sattler, Claudio Luchinat and 2 more

Open access · greenAbstract read
In one paragraph

Article in Chemphyschem : a European journal of chemical physics and physical chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Review
  3. Photoclick Chemistry: A Bright Idea.Chemical reviews · 2021
    Review
  4. The Photocatalyzed Thiol-ene reaction: A New Tag to Yield Fast, Selective and reversible Paramagnetic Tagging of Proteins.Chemphyschem : a European journal of chemical physics and physical chemistry · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Maxime DenisGiotto Biotech, S.R.L, Via Madonna del piano 6, 50019, Sesto Fiorentino (FI), Italy.ORCID 0000-0001-7285-2550
Charlotte SoftleyBiomolecular NMR, Department Chemie, Technical University of Munich, Lichtenbergstrasse 4, 85747, Garching, Germany.ORCID 0000-0001-9652-8835
Stefano GiuntiniDepartment of Chemistry "Ugo Schiff", University of Florence, Via della Lastruccia 3, 50019, Sesto Fiorentino (FI), Italy.ORCID 0000-0002-2292-8163
Matteo GentiliGiotto Biotech, S.R.L, Via Madonna del piano 6, 50019, Sesto Fiorentino (FI), Italy.ORCID 0000-0001-5391-0188
Enrico RaveraMagnetic Resonance Center (CERM), University of Florence, and Consorzio Interuniversitario Risonanze Magnetiche di Metalloproteine (C.I.R.M.M.P), Via L. Sacconi 6, 50019, Sesto FIorentino (FI), Italy.ORCID 0000-0001-7708-9208
Giacomo ParigiDepartment of Chemistry "Ugo Schiff", University of Florence, Via della Lastruccia 3, 50019, Sesto Fiorentino (FI), Italy.ORCID 0000-0002-1989-4644
Marco FragaiDepartment of Chemistry "Ugo Schiff", University of Florence, Via della Lastruccia 3, 50019, Sesto Fiorentino (FI), Italy.ORCID 0000-0002-8440-1690
Grzegorz PopowiczInstitute of Structural Biology, Helmholtz Center Munich, Neuherberg, Germany.ORCID 0000-0003-2818-7498
Michael SattlerBiomolecular NMR, Department Chemie, Technical University of Munich, Lichtenbergstrasse 4, 85747, Garching, Germany.ORCID 0000-0002-1594-0527
Claudio LuchinatDepartment of Chemistry "Ugo Schiff", University of Florence, Via della Lastruccia 3, 50019, Sesto Fiorentino (FI), Italy.ORCID 0000-0003-2271-8921
Linda CerofoliniMagnetic Resonance Center (CERM), University of Florence, and Consorzio Interuniversitario Risonanze Magnetiche di Metalloproteine (C.I.R.M.M.P), Via L. Sacconi 6, 50019, Sesto FIorentino (FI), Italy.ORCID 0000-0002-0795-9594
Cristina NativiDepartment of Chemistry "Ugo Schiff", University of Florence, Via della Lastruccia 3, 50019, Sesto Fiorentino (FI), Italy.ORCID 0000-0002-6312-3230
Interuniversity Consortium for Magnetic Resonance · ITHelmholtz Zentrum München · DEGiotto Biotech (Italy) · ITUniversity of Florence · IT

Funding

European Cooperation in Science and Technology CA15209Horizon 2020 675555iNEXT 653706Ministero dell'Istruzione, dell'Università e della Ricerca 2012SK7ASN
6 · The paper itself

Abstract

Paramagnetic restraints have been used in biomolecular NMR for the last three decades to elucidate and refine biomolecular structures, but also to characterize protein-ligand interactions. A common technique to generate such restraints in proteins, which do not naturally contain a (paramagnetic) metal, consists in the attachment to the protein of a lanthanide-binding-tag (LBT). In order to design such LBTs, it is important to consider the efficiency and stability of the conjugation, the geometry of the complex (conformational exchanges and coordination) and the chemical inertness of the ligand. Here we describe a photo-catalyzed thiol-ene reaction for the cysteine-selective paramagnetic tagging of proteins. As a model, we designed an LBT with a vinyl-pyridine moiety which was used to attach our tag to the protein GB1 in fast and irreversible fashion. Our tag T1 yields magnetic susceptibility tensors of significant size with different lanthanides and has been characterized using NMR and relaxometry measurements.

Indexed as

CatalysisCysteineLanthanoid Series ElementsLigandsMagnetic Resonance SpectroscopyNuclear Magnetic Resonance, BiomolecularPhotochemical ProcessesProteinsPyridinesSulfhydryl CompoundsCysteineLanthanoid Series ElementsLigandsProteinspyridinePyridinesSulfhydryl Compoundsbiomolecular NMRlanthanide coordinationparamagnetic tagsphotocatalyzed thiol-ene reactionprotein structure refinement

Identifiers

PMID32092218
PMCPMC7384118
OpenAlexW3007867594

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.