Evidence map›Paper›PMID 32092127›Full record

ArticlePloS one2020

Testis transcriptome profiling identified genes involved in spermatogenic arrest of cattleyak.

Shixin Wu, TserangDonko Mipam, Chuanfei Xu, Wangsheng Zhao, Mujahid Ali Shah, Chuanping Yi, Hui Luo, Xin Cai, Jincheng Zhong

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 54 citations in OpenAlex.

  1. Review
  2. Article
  3. Molecular characterization and expression ofVeterinary and animal science · 2025
    Review
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  9. NLife (Basel, Switzerland) · 2024
    Article
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  13. Review
  14. Article
  15. The Biological Characteristics and Differential Expression Patterns ofAnimals : an open access journal from MDPI · 2023
    Article
  16. Analysis of Chromatin Openness in Testicle Tissue of Yak and Cattle-Yak.International journal of molecular sciences · 2022
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Shixin WuKey Laboratory of Qinghai-Tibetan Plateau Animal Genetic Resource Reservation and Utilization, Sichuan Province and Ministry of Education, Southwest Minzu University, Chengdu, China.ORCID 0000-0002-7394-0058
TserangDonko MipamKey Laboratory of Qinghai-Tibetan Plateau Animal Genetic Resource Reservation and Utilization, Sichuan Province and Ministry of Education, Southwest Minzu University, Chengdu, China.
Chuanfei XuSchool of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, Sichuan, China.
Wangsheng ZhaoSchool of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, Sichuan, China.
Mujahid Ali ShahSchool of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, Sichuan, China.
Chuanping YiSchool of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, Sichuan, China.
Hui LuoSchool of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, Sichuan, China.
Xin CaiKey Laboratory of Qinghai-Tibetan Plateau Animal Genetic Resource Reservation and Utilization, Sichuan Province and Ministry of Education, Southwest Minzu University, Chengdu, China.
Jincheng ZhongKey Laboratory of Qinghai-Tibetan Plateau Animal Genetic Resource Reservation and Utilization, Sichuan Province and Ministry of Education, Southwest Minzu University, Chengdu, China.
Southwest University of Science and Technology · CNSouthwest Minzu University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCattleyak are the hybrid offspring between cattle and yak and combine yak hardiness with cattle productivity. Much attempt has been made to examine the mechanisms of male sterility caused by spermatogenic arrest, but yet there is no research systematically and precisely elucidated testis gene expression profiling between cattleyak and yak.

methodsTo explore the higher resolution comparative transcriptome map between the testes of yak and cattleyak, and further analyze the mRNA expression dynamics of spermatogenic arrest in cattleyak. We characterized the comparative transcriptome profile from the testes of yak and cattleyak using high-throughput sequencing. Then we used quantitative analysis to validate several differentially expressed genes (DEGs) in testicular tissue and spermatogenic cells.

resultsTestis transcriptome profiling identified 6477 DEGs (2919 upregulated and 3558 downregulated) between cattleyak and yak. Further analysis revealed that the marker genes and apoptosis regulatory genes for undifferentiated spermatogonia were upregulated, while the genes for differentiation maintenance were downregulated in cattleyak. A majority of DEGs associated with mitotic checkpoint, and cell cycle progression were downregulated in cattleyak during spermatogonial mitosis. Furthermore, almost all DEGs related to synaptonemal complex assembly, and meiotic progression presented no sign of expression in cattleyak. Even worse, dozens of genes involved in acrosome formation, and flagellar development were dominantly downregulated in cattleyak.

conclusionDEGs indicated that spermatogenic arrest of cattleyak may originate from the differentiation stage of spermatogonial stem cells and be aggravated during spermatogonial mitosis and spermatocyte meiosis, which contributes to the scarcely presented sperms in cattleyak.

Indexed as

AnimalsAzoospermiaCattleChimeraGene Expression ProfilingHigh-Throughput Nucleotide SequencingInfertility, MaleMaleMeiosisSpermatocytesSpermatogenesisSpermatogoniaSpermatozoaTestisTranscriptome

Identifiers

PMID32092127
PMCPMC7039509
OpenAlexW3008060627

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.