Evidence map›Paper›PMID 32090431›Full record

ArticleEnvironmental microbiology2020

Protein expression in the obligate hydrocarbon-degrading psychrophile Oleispira antarctica RB-8 during alkane degradation and cold tolerance.

Benjamin H Gregson, Gergana Metodieva, Metodi V Metodiev, Peter N Golyshin, Boyd A McKew

Open access · hybridAbstract read
In one paragraph

Article in Environmental microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Bioprospecting the potential of the microbial community associated to Antarctic marine sediments for hydrocarbon bioremediation.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Psychrophiles: A journey of hope.Journal of biosciences · 2021
    Review
  15. Comparative Proteomics ofMicroorganisms · 2020
    Article
  16. Differential Expression and PAH Degradation: WhatInternational journal of microbiology · 2020
    Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Benjamin H GregsonSchool of Life Sciences, University of Essex, Colchester, Essex, CO4 3SQ, UK.ORCID 0000-0001-8337-227X
Gergana MetodievaSchool of Life Sciences, University of Essex, Colchester, Essex, CO4 3SQ, UK.
Metodi V MetodievSchool of Life Sciences, University of Essex, Colchester, Essex, CO4 3SQ, UK.
Peter N GolyshinSchool of Natural Sciences, College of Environmental Sciences and Engineering, Bangor University, Bangor, UK.
Boyd A McKewSchool of Life Sciences, University of Essex, Colchester, Essex, CO4 3SQ, UK.
University of Essex · GBBangor University · GB

Funding

Eastern Academic Research ConsortiumHorizon 2020 Framework Programme Nr 634486Natural Environment Research Council NE/R016569/1
6 · The paper itself

Abstract

In cold marine environments, the obligate hydrocarbon-degrading psychrophile Oleispira antarctica RB-8, which utilizes aliphatic alkanes almost exclusively as substrates, dominates microbial communities following oil spills. In this study, LC-MS/MS shotgun proteomics was used to identify changes in the proteome induced during growth on n-alkanes and in cold temperatures. Specifically, proteins with significantly higher relative abundance during growth on tetradecane (n-C

Indexed as

Biodegradation, EnvironmentalPetroleum PollutionAlkanesChromatography, LiquidCold TemperatureCytochrome P-450 CYP4AFatty Acid DesaturasesFatty AcidsOceanospirillaceaeOxidation-ReductionOxidoreductasesPhylogenyProteomicsSeawaterTandem Mass SpectrometryAlkanesCytochrome P-450 CYP4AFatty Acid DesaturasesFatty Acidsn-tetradecaneOxidoreductases

Identifiers

PMID32090431
PMCPMC7318663
OpenAlexW3006794029

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.