Evidence map›Paper›PMID 32088761›Full record

ArticleApplied microbiology and biotechnology2020

Characterization of the highly immunogenic VP2 protrusion domain as a diagnostic antigen for members of Birnaviridae family.

Maryam Zafar, Majid Ali Shah, Aamir Shehzad, Anam Tariq, Mudasser Habib, Muhammad Muddassar, Muhammad Salahuddin Shah, Mazhar Iqbal, Farhid Hemmatzadeh, Moazur Rahman

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Article in Applied microbiology and biotechnology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.1field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Maryam ZafarDrug Discovery and Structural Biology Group, Health Biotechnology Division, National Institute for Biotechnology and Genetic Engineering (NIBGE), Faisalabad, Pakistan.
Majid Ali ShahDrug Discovery and Structural Biology Group, Health Biotechnology Division, National Institute for Biotechnology and Genetic Engineering (NIBGE), Faisalabad, Pakistan.
Aamir ShehzadDrug Discovery and Structural Biology Group, Health Biotechnology Division, National Institute for Biotechnology and Genetic Engineering (NIBGE), Faisalabad, Pakistan.
Anam TariqDrug Discovery and Structural Biology Group, Health Biotechnology Division, National Institute for Biotechnology and Genetic Engineering (NIBGE), Faisalabad, Pakistan.
Mudasser HabibVaccine Development Group, Animal Sciences Division, NIAB, Faisalabad, Pakistan.
Muhammad MuddassarDepartment of Biosciences, COMSATS-University Islamabad, Park Road, Islamabad, Pakistan.
Muhammad Salahuddin ShahVaccine Development Group, Animal Sciences Division, NIAB, Faisalabad, Pakistan.
Mazhar IqbalDrug Discovery and Structural Biology Group, Health Biotechnology Division, National Institute for Biotechnology and Genetic Engineering (NIBGE), Faisalabad, Pakistan.
Farhid HemmatzadehSchool of Animal and Veterinary Sciences, Roseworthy Campus, The University of Adelaide, Roseworthy, South Australia,, 5371, Australia. farhid.hemmatzadeh@adelaide.edu.au.ORCID https://orcid.org/0000-0002-4572-8869
Moazur RahmanDrug Discovery and Structural Biology Group, Health Biotechnology Division, National Institute for Biotechnology and Genetic Engineering (NIBGE), Faisalabad, Pakistan. moazur.rahman@fulbrightmail.org.ORCID https://orcid.org/0000-0003-2892-1250
National Institute for Biotechnology and Genetic Engineering · PKCOMSATS University Islamabad · PKNuclear Institute for Agriculture and Biology · PKThe University of Adelaide · AU

Funding

Higher Education Commision, Pakistan 1-8/HEC/HRD/2016/6289Higher Education Commision, Pakistan TDF 003-006
6 · The paper itself

Abstract

Birnaviridae is a family of viruses (birnaviruses) which consists of four genera, members of which cause diseases in fish, birds, mollusks, and insects. The genome of birnaviruses encodes the highly immunogenic VP2 capsid protein. In order to demonstrate that the VP2 protein can be exploited as a diagnostic antigen for birnaviruses, we developed a lateral flow assay based on the surface-exposed VP2 protrusion domain of a representative birnavirus, infectious bursal disease virus (IBDV) of serotype 1 which causes the highly devastating infectious bursal disease in chickens. The biophysical characterization of the purified domain reveals that the domain predominantly consists of β-sheets, exists in a trimeric form, and remains folded at high temperatures, making it suitable for diagnostic purposes. Owing to its highly immunogenic nature and excellent biophysical properties, we employed the VP2 protrusion domain in a gold nanoparticle-based lateral flow assay for rapid detection of anti-IBDV antibodies in serum samples of infected chickens. Our results indicate that the domain binds anti-IBDV antibodies with high specificity during laboratory testing and on-site testing. The lateral flow assay reported here yields comparable results in a qualitative manner as obtained through a commercial enzyme-linked immunosorbent assay (ELISA). As VP2 is a common capsid protein of birnaviruses, the lateral flow assay can be generalized for other birnaviruses, and members of Tetraviridae and Nodaviridae families which contain homologous VP2 capsid proteins.

Indexed as

AnimalsAntibodies, ViralAntigens, ViralBinding Sites, AntibodyBirnaviridaeBirnaviridae InfectionsChickensCircular DichroismGoldImmunoassayMetal NanoparticlesPoultry DiseasesProtein DomainsSpectroscopy, Fourier Transform InfraredViral Structural ProteinsAntibodies, ViralAntigens, ViralGoldViral Structural ProteinsVP2 protein, infectious bursal disease virusBirnavirusCircular dichroismGold nanoparticle-based lateral flow assayInfectious bursal disease virusInfrared spectroscopyVP2 protrusion domain

Identifiers

PMID32088761
PMCPMC7222154
OpenAlexW3008850259

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.