Evidence map›Paper›PMID 32085897›Full record

ArticleBiochemical and biophysical research communications2020

Cellular mRNA export factor UAP56 recognizes nucleic acid binding site of influenza virus NP protein.

Andrew K Morris, Zhen Wang, Austin L Ivey, Yihu Xie, Pate S Hill, Kevin L Schey, Yi Ren

Open access · greenAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

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  12. The emerging role of DEAD/H-box helicases in hepatitis B virus infection.Frontiers in cellular and infection microbiology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Andrew K MorrisDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA.
Zhen WangDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA; Mass Spectrometry Research Center, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA.
Austin L IveyDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA.
Yihu XieDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA.
Pate S HillDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA.
Kevin L ScheyDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA; Mass Spectrometry Research Center, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA.
Yi RenDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA. Electronic address: yi.ren@vanderbilt.edu.
Vanderbilt University · US

Funding

Mechanisms and Regulation of Nuclear mRNA ExportR35GM133743 · NIGMS · VANDERBILT UNIVERSITY · PI Yi Ren · 2019 to 2026
$3.6M
NIGMS NIH HHS R35 GM133743
6 · The paper itself

Abstract

Influenza A virus nucleoprotein (NP) is a structural component that encapsulates the viral genome into the form of ribonucleoprotein complexes (vRNPs). Efficient assembly of vRNPs is critical for the virus life cycle. The assembly route from RNA-free NP to the NP-RNA polymer in vRNPs has been suggested to require a cellular factor UAP56, but the mechanism is poorly understood. Here, we characterized the interaction between NP and UAP56 using recombinant proteins and showed that UAP56 features two NP binding sites. In addition to the UAP56 core comprised of two RecA domains, we identified the N-terminal extension (NTE) of UAP56 as a previously unknown NP binding site. In particular, UAP56-NTE recognizes the nucleic acid binding region of NP. This corroborates our observation that binding of UAP56-NTE and RNA to NP is mutually exclusive. Collectively, our results reveal the molecular basis for how UAP56 acts on RNA-free NP, and provide new insights into NP-mediated influenza genome packaging.

Indexed as

Binding SitesDEAD-box RNA HelicasesGenome, ViralHost-Pathogen InteractionsHumansNucleocapsid ProteinsRibonucleoproteinsRNA-Binding ProteinsRNA, MessengerViral Core ProteinsVirus AssemblyVirus ReplicationDDX39B protein, humanDEAD-box RNA HelicasesNP protein, Influenza A virusNucleocapsid ProteinsRibonucleoproteinsRNA-Binding ProteinsRNA, MessengerViral Core ProteinsDEAD-Box ATPaseHost-pathogen interactionInfluenza A virusmRNA nuclear exportRNA-Binding protein

Identifiers

PMID32085897
PMCPMC7132624
OpenAlexW3007236270

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.