Evidence map›Paper›PMID 32084159›Full record

ArticlePloS one2020

Iron metabolic pathways in the processes of sponge plasticity.

Alexander D Finoshin, Kim I Adameyko, Kirill V Mikhailov, Oksana I Kravchuk, Anton A Georgiev, Nicolay G Gornostaev, Igor A Kosevich, Victor S Mikhailov, Guzel R Gazizova, Elena I Shagimardanova and 2 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Rethinking Plasticity in Sponges.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2026
    Pooled it
  2. Article
  3. Review
  4. Animals : an open access journal from MDPI · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Conservative and Atypical Ferritins of Sponges.International journal of molecular sciences · 2021
    Article
  13. Mitochondrial Metal Ion Transport in Cell Metabolism and Disease.International journal of molecular sciences · 2021
    Review
  14. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Alexander D FinoshinN.K. Koltzov Institute of Developmental Biology, Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0003-3268-4913
Kim I AdameykoN.K. Koltzov Institute of Developmental Biology, Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0002-5429-3051
Kirill V MikhailovA.N. Belozersky Institute of Physical and Chemical Biology, Lomonosov Moscow State University, Moscow, Russia.
Oksana I KravchukN.K. Koltzov Institute of Developmental Biology, Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0002-8363-6666
Anton A GeorgievLomonosov Moscow State University, Moscow, Russia.
Nicolay G GornostaevN.K. Koltzov Institute of Developmental Biology, Russian Academy of Sciences, Moscow, Russia.
Igor A KosevichLomonosov Moscow State University, Moscow, Russia.
Victor S MikhailovN.K. Koltzov Institute of Developmental Biology, Russian Academy of Sciences, Moscow, Russia.
Guzel R GazizovaKazan Federal University, Kazan, Russia.
Elena I ShagimardanovaKazan Federal University, Kazan, Russia.
Oleg A GusevKazan Federal University, Kazan, Russia.
Yulia V LyupinaN.K. Koltzov Institute of Developmental Biology, Russian Academy of Sciences, Moscow, Russia.ORCID 0000-0002-9903-3544
Koltzov Institute of Developmental Biology · RUKazan Federal University · RULomonosov Moscow State University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ability to regulate oxygen consumption evolved in ancestral animals and is intrinsically linked to iron metabolism. The iron pathways have been intensively studied in mammals, whereas data on distant invertebrates are limited. Sea sponges represent the oldest animal phylum and have unique structural plasticity and capacity to reaggregate after complete dissociation. We studied iron metabolic factors and their expression during reaggregation in the White Sea cold-water sponges Halichondria panicea and Halisarca dujardini. De novo transcriptomes were assembled using RNA-Seq data, and evolutionary trends were analyzed with bioinformatic tools. Differential expression during reaggregation was studied for H. dujardini. Enzymes of the heme biosynthesis pathway and transport globins, neuroglobin (NGB) and androglobin (ADGB), were identified in sponges. The globins mutate at higher evolutionary rates than the heme synthesis enzymes. Highly conserved iron-regulatory protein 1 (IRP1) presumably interacts with the iron-responsive elements (IREs) found in mRNAs of ferritin (FTH1) and a putative transferrin receptor NAALAD2. The reaggregation process is accompanied by increased expression of IRP1, the antiapoptotic factor BCL2, the inflammation factor NFκB (p65), FTH1 and NGB, as well as by an increase in mitochondrial density. Our data indicate a complex mechanism of iron regulation in sponge structural plasticity and help to better understand general mechanisms of morphogenetic processes in multicellular species.

Indexed as

AnimalsComputational BiologyGene Expression ProfilingIronIron-Regulatory ProteinsMolecular Sequence AnnotationPhylogenyPoriferaRNA-SeqIronIron-Regulatory Proteins

Identifiers

PMID32084159
PMCPMC7034838
OpenAlexW3008937184

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.