Evidence map›Paper›PMID 32082699›Full record

ArticleHealthcare informatics research2020

Prediction of Drug-Drug Interactions by Using Profile Fingerprint Vectors and Protein Similarities.

Selma Dere, Serkan Ayvaz

Open access · goldAbstract read
In one paragraph

Article in Healthcare informatics research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.7field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Selma DereDepartment of Computer Engineering, Bahcesehir University, Besiktas, Istanbul, Turkey.ORCID https://orcid.org/0000-0002-9519-8165
Serkan AyvazDepartment of Software Engineering, Bahcesehir University, Besiktas, Istanbul, Turkey.ORCID https://orcid.org/0000-0003-2016-4443
Bahçeşehir University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesDrug-drug interaction (DDI) is a vital problem that threatens people's health. However, the prediction of DDIs through

methodsIn this study, widely known similarity-based computational DDI prediction methods were utilized to discover novel potential DDIs. More specifically, known interactions, drug targets, adverse effects, and protein similarities of drug pairs were used to construct drug fingerprints for the prediction of DDIs.

resultsUsing the drug interaction profile, our approach achieved an area under the curve (AUC) of 0.975 in the prediction of a potential DDI. The drug adverse effect profile and protein profile similarity-based methods resulted in AUC values of 0.685 and 0.895, respectively, in the prediction of DDIs.

conclusionsIn this study, we developed a computational approach to the prediction of potential drug interactions. The performance of the similarity-based computational methods was comparatively evaluated using a comprehensive real-world DDI dataset. The evaluations showed that the drug interaction profile information is a better predictor of DDIs compared to drug adverse effects and protein similarities among DDI pairs.

Indexed as

Computing MethodologiesDrug InteractionsDrug-Related Side Effects and Adverse ReactionsKnowledge DiscoveryPharmaceutical Databases

Identifiers

PMID32082699
PMCPMC7010946
OpenAlexW3006121805

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.