Evidence map›Paper›PMID 32082405›Full record

ArticlePlant methods2020

Drought and heat stress tolerance screening in wheat using computed tomography.

Jessica Schmidt, Joelle Claussen, Norbert Wörlein, Anja Eggert, Delphine Fleury, Trevor Garnett, Stefan Gerth

Open access · goldAbstract read
In one paragraph

Article in Plant methods, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
16.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 84 citations in OpenAlex.

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  17. An Overview of Factors Affecting the Functional Quality of Common Wheat (International journal of molecular sciences · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Jessica Schmidt1School of Agriculture, Food and Wine, The University of Adelaide, Glen Osmond, SA Australia.
Joelle ClaussenFraunhofer Development Center X-Ray Technology, Fürth, Germany.ORCID 0000-0001-7525-3705
Norbert WörleinFraunhofer Development Center X-Ray Technology, Fürth, Germany.
Anja EggertFraunhofer Development Center X-Ray Technology, Fürth, Germany.
Delphine Fleury1School of Agriculture, Food and Wine, The University of Adelaide, Glen Osmond, SA Australia.
Trevor Garnett1School of Agriculture, Food and Wine, The University of Adelaide, Glen Osmond, SA Australia.
Stefan GerthFraunhofer Development Center X-Ray Technology, Fürth, Germany.
The University of Adelaide · AUInstitut Mondor de Recherche Biomédicale · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundImproving abiotic stress tolerance in wheat requires large scale screening of yield components such as seed weight, seed number and single seed weight, all of which is very laborious, and a detailed analysis of seed morphology is time-consuming and visually often impossible. Computed tomography offers the opportunity for much faster and more accurate assessment of yield components.

resultsAn X-ray computed tomographic analysis was carried out on 203 very diverse wheat accessions which have been exposed to either drought or combined drought and heat stress. Results demonstrated that our computed tomography pipeline was capable of evaluating grain set with an accuracy of 95-99%. Most accessions exposed to combined drought and heat stress developed smaller, shrivelled seeds with an increased seed surface. As expected, seed weight and seed number per ear as well as single seed size were significantly reduced under combined drought and heat compared to drought alone. Seed weight along the ear was significantly reduced at the top and bottom of the wheat spike.

conclusionsWe were able to establish a pipeline with a higher throughput with scanning times of 7 min per ear and accuracy than previous pipelines predicting a set of agronomical important seed traits and to visualize even more complex traits such as seed deformations. The pipeline presented here could be scaled up to use for high throughput, high resolution phenotyping of tens of thousands of heads, greatly accelerating breeding efforts to improve abiotic stress tolerance.

Indexed as

Genetic diversityHigh-throughputPhenotypingSeed morphologyX-rayYield

Identifiers

PMID32082405
PMCPMC7017466
OpenAlexW3011001511

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.