Evidence map›Paper›PMID 32080722›Full record

ArticleJournal of experimental botany2020

Genetic control of root architectural plasticity in maize.

Hannah M Schneider, Stephanie P Klein, Meredith T Hanlon, Eric A Nord, Shawn Kaeppler, Kathleen M Brown, Andrew Warry, Rahul Bhosale, Jonathan P Lynch

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
9.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 67 citations in OpenAlex.

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  14. Evaluation of Inbred Maize (Plants (Basel, Switzerland) · 2023
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  15. Mining genes regulating root system architecture in maize based on data integration analysis.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Hannah M SchneiderDepartment of Plant Science, The Pennsylvania State University, University Park, PA, USA.
Stephanie P KleinDepartment of Plant Science, The Pennsylvania State University, University Park, PA, USA.
Meredith T HanlonDepartment of Plant Science, The Pennsylvania State University, University Park, PA, USA.
Eric A NordDepartment of Plant Science, The Pennsylvania State University, University Park, PA, USA.
Shawn KaepplerDepartment of Agronomy, University of Wisconsin, Madison, WI, USA.
Kathleen M BrownDepartment of Plant Science, The Pennsylvania State University, University Park, PA, USA.
Andrew WarryAdvanced Data Analysis Centre, University of Nottingham, Nottingham, UK.
Rahul BhosalePlant and Crop Sciences, School of Biosciences, University of Nottingham, Sutton Bonington, UK.
Jonathan P LynchDepartment of Plant Science, The Pennsylvania State University, University Park, PA, USA.
Pennsylvania State University · USUniversity of Nottingham · GBUniversity of Wisconsin–Madison · US

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

Root phenotypes regulate soil resource acquisition; however, their genetic control and phenotypic plasticity are poorly understood. We hypothesized that the responses of root architectural phenes to water deficit (stress plasticity) and different environments (environmental plasticity) are under genetic control and that these loci are distinct. Root architectural phenes were phenotyped in the field using a large maize association panel with and without water deficit stress for three seasons in Arizona and without water deficit stress for four seasons in South Africa. All root phenes were plastic and varied in their plastic response. We identified candidate genes associated with stress and environmental plasticity and candidate genes associated with phenes in well-watered conditions in South Africa and in well-watered and water-stress conditions in Arizona. Few candidate genes for plasticity overlapped with those for phenes expressed under each condition. Our results suggest that phenotypic plasticity is highly quantitative, and plasticity loci are distinct from loci that control phene expression in stress and non-stress, which poses a challenge for breeding programs. To make these loci more accessible to the wider research community, we developed a public online resource that will allow for further experimental validation towards understanding the genetic control underlying phenotypic plasticity.

Indexed as

Plant RootsZea maysPhenotypePlant BreedingSouth AfricaArchitectureassociation mappingmaizeplasticityrootwater deficit stress

Identifiers

PMID32080722
PMCPMC7260711
OpenAlexW3008463741

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.