Evidence map›Paper›PMID 32079343›Full record

ArticleCancers2020

Loss of CDKN1A mRNA and Protein Expression Are Independent Predictors of Poor Outcome in Chromophobe Renal Cell Carcinoma Patients.

Riuko Ohashi, Silvia Angori, Aashil A Batavia, Niels J Rupp, Yoichi Ajioka, Peter Schraml, Holger Moch

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 31 citations in OpenAlex.

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  13. MonoallelicFrontiers in immunology · 2022
    Article
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  15. Observational
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Riuko OhashiHistopathology Core Facility, Faculty of Medicine, Niigata University, Niigata 951-8510, Japan.
Silvia AngoriDepartment of Pathology and Molecular Pathology, University and University Hospital Zurich, Zurich CH-8091, Switzerland.
Aashil A BataviaDepartment of Pathology and Molecular Pathology, University and University Hospital Zurich, Zurich CH-8091, Switzerland.
Niels J RuppDepartment of Pathology and Molecular Pathology, University and University Hospital Zurich, Zurich CH-8091, Switzerland.
Yoichi AjiokaHistopathology Core Facility, Faculty of Medicine, Niigata University, Niigata 951-8510, Japan.
Peter SchramlDepartment of Pathology and Molecular Pathology, University and University Hospital Zurich, Zurich CH-8091, Switzerland.
Holger MochDepartment of Pathology and Molecular Pathology, University and University Hospital Zurich, Zurich CH-8091, Switzerland.
University Hospital of Zurich · CHNiigata University · JP

Funding

Niigata Foundation for the Promotion of Medicine 2015Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung S-87701-03-01
6 · The paper itself

Abstract

Chromophobe renal cell carcinoma (chRCC) patients have good prognosis. Only 5%-10% patients die of metastatic disease after tumorectomy, but tumor progression cannot be predicted by histopathological parameters alone. chRCC are characterized by losses of many chromosomes, whereas gene mutations are rare. In this study, we aim at identifying genes indicating chRCC progression. A bioinformatic approach was used to correlate chromosomal loss and mRNA expression from 15287 genes from The Cancer Genome Atlas (TCGA) database. All genes in TCGA chromophobe renal cancer dataset (KICH) for which a significant correlation between chromosomal loss and mRNA expression was shown, were identified and their associations with outcome was assessed. Genome-wide DNA copy-number alterations were analyzed by Affymetrix OncoScan

Indexed as

CDKN1A expressionchromophobe renal cell carcinomacopy number losspatient survivalprognosis

Identifiers

PMID32079343
PMCPMC7072616
OpenAlexW3006064742

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.