ReviewMolecules (Basel, Switzerland)2020
Modeling to Understand Plant Protein Structure-Function Relationships-Implications for Seed Storage Proteins.
Review in Molecules (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.
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Who cites it
32 citing papers in PubMed.
- MultilevelCurrent research in structural biology · 2026Article
- Hydrogen-rich water mitigates zinc oxide nanoparticle toxicity in arugula: a focus on growth and antioxidant defense.BMC plant biology · 2026Article
- A One Health Framework for Proteomics Across the Tree of Life to Advance Food Security, Animal Health, and Ecosystem Resilience.Proteomes · 2026Review
- CryoFSL: an annotation-efficient, few-shot learning framework for robust protein particle picking in cryo-electron microscopy micrographs.Briefings in bioinformatics · 2026Article
- The fate of dietary protein in the gastrointestinal tract and implications for colonic disease.Nature reviews. Gastroenterology & hepatology · 2026Review
- Exogenous Glutathione and Nitric Oxide Improve Waterlogging Stress Tolerance in Maize.Plant-environment interactions (Hoboken, N.J.) · 2026Article
- Biostimulants combination enhance the metabolites content of brassica Oleracea var. Botrytis curds cultivated in the desert region of Basrah Governorate.BMC plant biology · 2026Article
- Plasma Seed Priming Can Improve the Early Seedling Establishment and Antioxidant Activity of Water Convolvulus Microgreens.Plants (Basel, Switzerland) · 2025Article
- CryoFSL: An Annotation-Efficient, Few-Shot Learning Framework for Robust Protein Particle Picking in Cryo-EM Micrographs.bioRxiv : the preprint server for biology · 2025Article
- The development of a silage-based biorefinery to deliver the maximum nutritional benefit for human consumption from UK grasslands.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025Article
- Seed protein electrophoresis in plant genetics: Commemorating the pioneering contributions of Prof. Chittaranjan Kole and team to the foundation of plant proteomics.The plant genome · 2025Review
- Review
- Comprehensive Characterization of Raw and Processed Quinoa from Conventional and Organic Farming by Label-Free Shotgun Proteomics.Journal of agricultural and food chemistry · 2025Article
- Elucidating the role of compositional and processing variables in tailoring the technological functionalities of plant protein ingredients.Current research in food science · 2025Review
- Integrating Computational Design and Experimental Approaches for Next-Generation Biologics.Biomolecules · 2024Review
- Expression of Iron Metabolism Genes Is Potentially Regulated by DOF Transcription Factors inInternational journal of molecular sciences · 2024Article
- Validation of low-cost reflectometer to identify phytochemical accumulation in food crops.Scientific reports · 2024Article
- Microalgae biomass as a conditioner and regulator of soil quality and fertility.Environmental monitoring and assessment · 2024Article
- Chemical Composition, Lipid-Soluble Bioactive Compounds and Potential Health Benefits of the MossPlants (Basel, Switzerland) · 2023Article
- Applications of Enzyme Technology to Enhance Transition to Plant Proteins: A Review.Foods (Basel, Switzerland) · 2023Review
Corrections and comments
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Authors and funding
4 authors.
Funding
Abstract
Proteins are among the most important molecules on Earth. Their structure and aggregation behavior are key to their functionality in living organisms and in protein-rich products. Innovations, such as increased computer size and power, together with novel simulation tools have improved our understanding of protein structure-function relationships. This review focuses on various proteins present in plants and modeling tools that can be applied to better understand protein structures and their relationship to functionality, with particular emphasis on plant storage proteins. Modeling of plant proteins is increasing, but less than 9% of deposits in the Research Collaboratory for Structural Bioinformatics Protein Data Bank come from plant proteins. Although, similar tools are applied as in other proteins, modeling of plant proteins is lagging behind and innovative methods are rarely used. Molecular dynamics and molecular docking are commonly used to evaluate differences in forms or mutants, and the impact on functionality. Modeling tools have also been used to describe the photosynthetic machinery and its electron transfer reactions. Storage proteins, especially in large and intrinsically disordered prolamins and glutelins, have been significantly less well-described using modeling. These proteins aggregate during processing and form large polymers that correlate with functionality. The resulting structure-function relationships are important for processed storage proteins, so modeling and simulation studies, using up-to-date models, algorithms, and computer tools are essential for obtaining a better understanding of these relationships.
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