Evidence map›Paper›PMID 32077937›Full record

ArticleHuman molecular genetics2020

The HOPS complex subunit VPS39 controls ciliogenesis through autophagy.

Daniela Iaconis, Claudia Crina, Simona Brillante, Alessia Indrieri, Manuela Morleo, Brunella Franco

Open access · hybridAbstract read
In one paragraph

Article in Human molecular genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
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  10. Biallelic variants in CENPF causing a phenotype distinct from Strømme syndrome.American journal of medical genetics. Part C, Seminars in medical genetics · 2022
    Article
  11. Review
  12. Pathophysiology of Primary Cilia: Signaling and Proteostasis Regulation.Frontiers in cell and developmental biology · 2022
    Review
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Daniela IaconisTelethon Institute of Genetics and Medicine, 80078 Pozzuoli, Italy.
Claudia CrinaTelethon Institute of Genetics and Medicine, 80078 Pozzuoli, Italy.
Simona BrillanteTelethon Institute of Genetics and Medicine, 80078 Pozzuoli, Italy.
Alessia IndrieriTelethon Institute of Genetics and Medicine, 80078 Pozzuoli, Italy.
Manuela MorleoTelethon Institute of Genetics and Medicine, 80078 Pozzuoli, Italy.
Brunella FrancoTelethon Institute of Genetics and Medicine, 80078 Pozzuoli, Italy.
Telethon Institute Of Genetics And Medicine · ITInstitute of Genetic and Biomedical Research · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Primary cilia are microtubule-based organelles that assemble and protrude from the surface of most mammalian cells during quiescence. The biomedical relevance of cilia is indicated by disorders ascribed to cilia dysfunction, known as ciliopathies, that display distinctive features including renal cystic disease. In this report, we demonstrate that vacuolar protein sorting 39 (VPS39), a component of the homotypic fusion and vacuole protein sorting (HOPS) complex, acts as a negative regulator of ciliogenesis in human renal cells, by controlling the localization of the intraflagellar transport 20 protein at the base of cilia through autophagy. Moreover, we show that VPS39 controls ciliogenesis through autophagy also in vivo in renal tubules of medaka fish. These observations suggest a direct involvement of the HOPS complex in the regulation of autophagy-mediated ciliogenesis and eventually in target selection. Interestingly, we show that the impact of autophagy modulation on ciliogenesis is cell-type dependent and strictly related to environmental stimuli. This report adds a further tile to the cilia-autophagy connection and suggests that VPS39 could represent a new biological target for the recovery of the cilia-related phenotypes observed in the kidneys of patients affected by ciliopathies.

Indexed as

AutophagyAnimalsAutophagy-Related ProteinsCiliaCiliopathiesHumansKidneyOryziasProtein BindingVacuolesVesicular Transport ProteinsAutophagy-Related ProteinsVesicular Transport ProteinsVPS39 protein, human

Identifiers

PMID32077937
PMCPMC7158379
OpenAlexW3007895353

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.