Evidence map›Paper›PMID 32076369›Full record

ReviewBioinformatics and biology insights2020

Multi-omics Data Integration, Interpretation, and Its Application.

Indhupriya Subramanian, Srikant Verma, Shiva Kumar, Abhay Jere, Krishanpal Anamika

Registry-linked trialAbstract readReview
In one paragraph

Review in Bioinformatics and biology insights, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05631119 (Biorepository of Biospecimen Samples in Matched Healthy Control Participants and Participants Diagnosed With Diabetic Kidney Disease, Chronic Kidney Disease, or Type 2 Diabetes), which is not on this map. Cited by 787 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
787citing papers in PubMed, 4 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05631119 completednot on this mapstarted 2022, after this paper: background citation

Biorepository of Biospecimen Samples in Matched Healthy Control Participants and Participants Diagnosed With Diabetic Kidney Disease, Chronic Kidney Disease, or Type 2 Diabetes

Typeobservational_patient_registrySponsorSanguine BiosciencesRan2022 to 2023Enrolled40ConditionsDiabetic Kidney Disease, Diabetes Type 2, Chronic Kidney Diseases, Healthy
3 · Its place in the literature

Who cites it

787 citing papers in PubMed, 4 syntheses or guidelines pooled it.

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727 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Indhupriya SubramanianLABS, Persistent Systems, Pune, India.
Srikant VermaLABS, Persistent Systems, Pune, India.
Shiva KumarLABS, Persistent Systems, Pune, India.
Abhay JereInnovation Cell, Ministry of Human Resource Development, New Delhi, India.
Krishanpal AnamikaLABS, Persistent Systems, Pune, India.ORCID https://orcid.org/0000-0001-6624-6183

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To study complex biological processes holistically, it is imperative to take an integrative approach that combines multi-omics data to highlight the interrelationships of the involved biomolecules and their functions. With the advent of high-throughput techniques and availability of multi-omics data generated from a large set of samples, several promising tools and methods have been developed for data integration and interpretation. In this review, we collected the tools and methods that adopt integrative approach to analyze multiple omics data and summarized their ability to address applications such as disease subtyping, biomarker prediction, and deriving insights into the data. We provide the methodology, use-cases, and limitations of these tools; brief account of multi-omics data repositories and visualization portals; and challenges associated with multi-omics data integration.

Indexed as

biomarker predictiondata integrationdata repositoriesdisease subtypingmulti-omics

Identifiers

PMID32076369
PMCPMC7003173

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.