Evidence map›Paper›PMID 32076038›Full record

ArticleScientific reports2020

A genetic analysis identifies a haplotype at adiponectin locus: Association with obesity and type 2 diabetes.

Sayantani Pramanik Palit, Roma Patel, Shahnawaz D Jadeja, Nirali Rathwa, Ankit Mahajan, A V Ramachandran, Manoj K Dhar, Swarkar Sharma, Rasheedunnisa Begum

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 23 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 2 pooled it
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 2 syntheses or guidelines pooled it, 44 citations in OpenAlex.

  1. A Systematic Narrative Review onEndocrine, metabolic & immune disorders drug targets · 2024
    Pooled it
  2. Journal of diabetes research · 2020
    Pooled it
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  8. Association ofIranian journal of public health · 2024
    Review
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  16. Effect of Genetic Variations in theDiabetes, metabolic syndrome and obesity : targets and therapy · 2022
    Article
  17. Article
  18. Association ofDiabetes, metabolic syndrome and obesity : targets and therapy · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Sayantani Pramanik PalitDepartment of Biochemistry, Faculty of Science, The Maharaja Sayajirao University of Baroda, Vadodara, 390002, Gujarat, India.
Roma Patel *Department of Biochemistry, Faculty of Science, The Maharaja Sayajirao University of Baroda, Vadodara, 390002, Gujarat, India.
Shahnawaz D Jadeja *Department of Biochemistry, Faculty of Science, The Maharaja Sayajirao University of Baroda, Vadodara, 390002, Gujarat, India.
Nirali RathwaDepartment of Biochemistry, Faculty of Science, The Maharaja Sayajirao University of Baroda, Vadodara, 390002, Gujarat, India.
Ankit MahajanHuman Genetics Research Group, School of Biotechnology, S.M.V.D.U, Katra, 182320, Jammu and Kashmir, India.
A V RamachandranDepartment of Zoology, Faculty of Science, The Maharaja Sayajirao University of Baroda, Vadodara, 390002, Gujarat, India.ORCID http://orcid.org/0000-0002-2326-0994
Manoj K DharSchool of Biotechnology, University of Jammu, Jammu, 180001, Jammu and Kashmir, India.
Swarkar SharmaHuman Genetics Research Group, School of Biotechnology, S.M.V.D.U, Katra, 182320, Jammu and Kashmir, India.ORCID http://orcid.org/0000-0001-8857-5906
Rasheedunnisa BegumDepartment of Biochemistry, Faculty of Science, The Maharaja Sayajirao University of Baroda, Vadodara, 390002, Gujarat, India. rasheedunnisab@yahoo.co.in.ORCID http://orcid.org/0000-0003-3446-0980
Maharaja Sayajirao University of Baroda · INUniversity of Jammu · INShri Mata Vaishno Devi University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adiponectin is a prime determinant of the status of insulin resistance. Association studies between adiponectin (ADIPOQ) gene single nucleotide polymorphisms (SNPs) and metabolic diseases have been reported earlier. However, results are ambiguous due to apparent contradictions. Hence, we investigated (1) the association between ADIPOQ SNPs: -11377C/G, +10211T/G, +45T/G and +276G/T for the risk towards type 2 diabetes (T2D) and, (2) genotype-phenotype association of these SNPs with various biochemical parameters in two cohorts. Genomic DNA of diabetic patients and controls from Gujarat and, Jammu and Kashmir (J&K) were genotyped using PCR-RFLP, TaqMan assay and MassArray. Transcript levels of ADIPOQ were assessed in visceral adipose tissue samples, and plasma adiponectin levels were estimated by qPCR and ELISA respectively. Results suggest: (i) reduced HMW adiponectin/total adiponectin ratio in Gujarat patients and its association with +10211T/G and +276G/T, and reduced ADIPOQ transcript levels in T2D, (ii) association of the above SNPs with increased FBG, BMI, TG, TC in Gujarat patients and (iii) increased GGTG haplotype in obese patients of Gujarat population and, (iv) association of -11377C/G with T2D in J&K population. Reduced HMW adiponectin, in the backdrop of obesity and ADIPOQ genetic variants might alter metabolic profile posing risk towards T2D.

Indexed as

Genetic Association StudiesGenetic LociGenetic Predisposition to DiseaseAdiponectinAdultAgedCase-Control StudiesDiabetes Mellitus, Type 2FemaleGene FrequencyHaplotypesHumansIndiaLinkage DisequilibriumMaleMiddle AgedAdiponectinRNA, Messenger

Identifiers

PMID32076038
PMCPMC7031532
OpenAlexW3006860480

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.