Evidence map›Paper›PMID 32075912›Full record

ArticleThe Journal of biological chemistry2020

Regulation of gene expression during the fasting-feeding cycle of the liver displays mouse strain specificity.

Yuling Chi, Dou Yeon Youn, Alus M Xiaoli, Li Liu, Jacob B Pessin, Fajun Yang, Jeffrey E Pessin

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  5. Widespread discordance between mRNA expression, protein abundance andbioRxiv : the preprint server for biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Yuling ChiDepartment of Medicine, Albert Einstein College of Medicine, Bronx, New York 10461 yuling.chi@einsteinmed.org.
Dou Yeon YounDepartment of Medicine, Albert Einstein College of Medicine, Bronx, New York 10461.
Alus M XiaoliDepartment of Medicine, Albert Einstein College of Medicine, Bronx, New York 10461.
Li LiuDepartment of Medicine, Albert Einstein College of Medicine, Bronx, New York 10461.ORCID 0000-0001-5936-2792
Jacob B PessinDepartment of Medicine, Albert Einstein College of Medicine, Bronx, New York 10461.
Fajun YangDepartment of Medicine, Albert Einstein College of Medicine, Bronx, New York 10461.ORCID 0000-0002-7120-2449
Jeffrey E PessinDepartment of Medicine, Albert Einstein College of Medicine, Bronx, New York 10461 Jeffrey.Pessin@einsteinmed.org.
Albert Einstein College of Medicine · US

Funding

Coordinating and Bioinformatics Unit for the MMPC/DiaCompU24DK076169 · NIDDK · AUGUSTA UNIVERSITY · PI MCINDOE, RICHARD A. · 2006 to 2018
$42.4M
Stable Isotope and Metabolomics CoreP60DK020541 · NIDDK · YESHIVA UNIVERSITY · PI PESSIN, JEFFREY E. · 1986 to 2014
$29.8M
Translational Research CoreP30DK020541 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI STREAMSON C CHUA · 2015 to 2026
$27.7M
The Mediator complex in the coordinate regulation of lipogenic gene expressionR01DK110063 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI ELISCOVICH, CAROLINA INES, PESSIN, JEFFREY E. · 2016 to 2025
$5.9M
OBESITY RESEARCH CENTER TRAINING PROGRAMT32DK007559 · NIDDK · ST. LUKE'S-ROOSEVELT INST FOR HLTH SCIS · PI DYMPNA GALLAGHER · 1989 to 2026
$4.3M
Regulation of Brown Fat Development and Function by Cyclin CR01DK098439 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI PESSIN, JEFFREY E., YANG, FAJUN JAMES · 2013 to 2021
$3.8M
Novel effectors of insulin action in the liverR01DK117417 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI YANG, FAJUN JAMES · 2020 to 2023
$2.1M
NIDDK NIH HHS P30 DK020541NIDDK NIH HHS P60 DK020541NIDDK NIH HHS R01 DK098439NIDDK NIH HHS R01 DK110063NIDDK NIH HHS R01 DK117417NIDDK NIH HHS T32 DK007559NIDDK NIH HHS U24 DK076169
6 · The paper itself

Abstract

The liver maintains metabolic homeostasis by integrating the regulation of nutrient status with both hormonal and neural signals. Many studies on hepatic signaling in response to nutrients have been conducted in mice. However, no in-depth study is currently available that has investigated genome-wide changes in gene expression during the normal physiological fasting-feeding cycle in nutrient-sensitive and -insensitive mice. Using two strains of mice, C57BL/6J and BALB/cJ, and deploying deep RNA-Seq complemented with quantitative RT-PCR, we found that feeding causes substantial and transient changes in gene expression in the livers of both mouse strains. The majority of significantly changed transcripts fell within the areas of biological regulation and cellular and metabolic processes. Among the metabolisms of three major types of macronutrients (

Indexed as

EatingFastingGene Expression RegulationLipid MetabolismAnimalsBiomarkersGene Expression ProfilingLiverMiceMice, Inbred BALB CMice, Inbred C57BLSpecies SpecificityBiomarkersBALB/cJC57BL/6Jgene regulationlipid metabolismlivermRNA-Seqnutrient signalingnutritiontranscriptometranscriptomics

Identifiers

PMID32075912
PMCPMC7152778
OpenAlexW3006763125

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.