Evidence map›Paper›PMID 32074549›Full record

ArticleMicrobes and environments2020

Distribution of the Harmful Bloom-Forming Cyanobacterium, Microcystis aeruginosa, in 88 Freshwater Environments across Japan.

Takafumi Kataoka, Kako Ohbayashi, Yuki Kobayashi, Hiroyuki Takasu, Shin-Ichi Nakano, Ryuji Kondo, Yoshikuni Hodoki

Open access · diamondAbstract read
In one paragraph

Article in Microbes and environments, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Takafumi KataokaFaculty of Marine Science and Technology, Fukui Prefectural University.
Kako OhbayashiGraduate School of Arts and Sciences, The University of Tokyo.
Yuki KobayashiFaculty of Health Sciences Yamaguchi University Graduate School of Medicine.
Hiroyuki TakasuFaculty of Environmental Science, Nagasaki University.
Shin-Ichi NakanoCenter for Ecological Research, Kyoto University.
Ryuji KondoFaculty of Marine Science and Technology, Fukui Prefectural University.
Yoshikuni HodokiCenter for Ecological Research, Kyoto University.
Fukui Prefectural University · JPKyoto University · JPNagasaki University · JPThe University of Tokyo · JPYamaguchi University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microcystis aeruginosa was quantitatively surveyed in 88 freshwater environments across Japan within 3‍ ‍weeks in 2011. In order to clarify the distribution pattern of M. aeruginosa at the intra-species level, three major genotypes, which were defined by 16S-23S rRNA inter-transcribed-spacer (ITS) regions, were selectively detected using quantitative real-time PCR assays. Of the 68 sites at which the Microcystis intergenic-spacer region of the phycocyanin (IGS-PC) gene was detected, the M. aeruginosa morphotype-related genotype (MG1) dominated in 41 sites, followed by the non-toxic M. wesenbergii-related genotype (MG3). A correlation analysis showed that total nitrogen and phosphate positively correlated with the abundance of IGS-PC, which positively correlated with microcystin synthetase gene abundance. A redundancy analysis of genotype compositions showed that pH positively correlated with the dominance of MG3 and negatively correlated with MG1, i.e., both toxic and non-toxic genotypes. Our survey of Microcystis populations over a wide area revealed that MG1 is a dominant genotype in Japan.

Indexed as

Environmental MicrobiologyHarmful Algal BloomBacterial ProteinsDNA, Ribosomal SpacerFresh WaterGenotypeHydrogen-Ion ConcentrationJapanMicrocystisNitrogenPeptide SynthasesPhosphatesPhycocyaninBacterial ProteinsDNA, Ribosomal Spacermicrocystin synthetase ANitrogenPeptide SynthasesPhosphatesPhycocyanin16S–23S ITSgenotype compositionMicrocystis aeruginosaqPCRwide area distribution

Identifiers

PMID32074549
PMCPMC7104289
OpenAlexW3006986891

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.