Evidence map›Paper›PMID 32072082›Full record

ArticleNon-coding RNA research2019

Identification of novel microRNAs and their targets in Chlorophytum borivilianum by small RNA and degradome sequencing.

Monika Kajal, Nishant Kaushal, Ravneet Kaur, Kashmir Singh

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Non-coding RNA research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Monika KajalDepartment of Biotechnology, Panjab University, BMS Block-I, Sector 25, Chandigarh, 160014, India.
Nishant KaushalDepartment of Biotechnology, Panjab University, BMS Block-I, Sector 25, Chandigarh, 160014, India.
Ravneet KaurDepartment of Biotechnology, Panjab University, BMS Block-I, Sector 25, Chandigarh, 160014, India.
Kashmir SinghDepartment of Biotechnology, Panjab University, BMS Block-I, Sector 25, Chandigarh, 160014, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant specific miRNAs (Novel miRNAs) are well known to perform distinctive functions in biological processes. Identification of new miRNAs is necessary to understand their gene regulation. Degradome provides an opportunity to explore the miRNA functions by comparing the miRNA population and their degraded products. In the present study, Small RNA sequencing data was used to identify novel miRNAs. Further, degradome sequencing was carried out to identify miRNAs targets in the plant,

Indexed as

AGO, ArgonauteBLAST, Basic local Alignment Search ToolBP, Biological ProcessCC, Cellular ComponentChlorophytum borivilianumDegradomeFAO, Food and Agriculture Organization of the United NationsGO, Gene OntologyIL, InterleukinIllumina sequencingiNOS, Inducible Nitric Oxide SynthaseKEGG, Kyoto Encyclopedia of Genes and GenomesMCF-7, PC3, HCT-116, Types of cell linesMEP, 2-C-methyl-Derythritol-4-phosphate pathwayMFEs, Minimum Fold EnergiesMF, Molecular FunctionmgmL−1, milligram per millilitremicroRNAsMTT, 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromideMVA, Mevalonic Acid Pathwaynt, nucleotideRdDM, RNA-directed DNA methylationSRASRA, Sequencing Read ArchieveTNF, Tumor Necrosis Factor

Identifiers

PMID32072082
PMCPMC7012778

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.