Evidence map›Paper›PMID 32071333›Full record

ArticleScientific reports2020

Species-specific genetic variation in response to deep-sea environmental variation amongst Vulnerable Marine Ecosystem indicator taxa.

Cong Zeng, Ashley A Rowden, Malcolm R Clark, Jonathan P A Gardner

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Cong ZengCollege of Animal Science and Technology, Hunan Agricultural University, Changsha, China. congzeng@hunau.edu.cn.ORCID http://orcid.org/0000-0003-1003-9382
Ashley A RowdenSchool of Biological Sciences, Victoria University of Wellington, Wellington, 6140, New Zealand.
Malcolm R ClarkCoasts and Oceans National Centre, National Institute for Water and Atmospheric Research, Private Bag, 14901, Kilbirnie, Wellington, New Zealand.
Jonathan P A GardnerSchool of Biological Sciences, Victoria University of Wellington, Wellington, 6140, New Zealand.ORCID http://orcid.org/0000-0002-6943-2413
Victoria University of Wellington · NZNational Institute of Water and Atmospheric Research · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding the ecological processes that shape spatial genetic patterns of population structure is critical for understanding evolutionary dynamics and defining significant evolutionary and management units in the deep sea. Here, the role of environmental factors (topographic, physico-chemical and biological) in shaping the population genetic structure of four deep-sea habitat-forming species (one sponge - Poecillastra laminaris, three corals - Goniocorella dumosa, Madrepora oculata, Solenosmilia variabilis) was investigated using seascape genetics. Genetic data (nuclear and mitochondrial sequences and microsatellite multilocus genotypes) and environmental variables were employed to build individual-based and population-level models. The results indicated that environmental factors affected genetic variation differently amongst the species, as well as at different geographic scales. For individual-based analyses, different environmental variables explained genetic variation in P. laminaris (dissolved oxygen), G. dumosa (dynamic topography), M. oculata (sea surface temperature and surface water primary productivity), and S. variabilis (tidal current speed). At the population level, factors related to current and food source explained the regional genetic structure in all four species, whilst at the geomorphic features level, factors related to food source and topography were most important. Environmental variation in these parameters may be acting as barriers to gene flow at different scales. This study highlights the utility of seascape genetic studies to better understand the processes shaping the genetic structure of organisms, and to identify environmental factors that can be used to locate sites for the protection of deep-sea Vulnerable Marine Ecosystems.

Indexed as

Conservation of Natural ResourcesEcosystemGenetics, PopulationAnimalsAnthozoaAquatic OrganismsGene FlowGenetic VariationGenotypeMicrosatellite RepeatsPoriferaSpecies SpecificityTemperature

Identifiers

PMID32071333
PMCPMC7028729
OpenAlexW3008778759

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.