ArticlemSystems2020
Comparative Analysis of Root Microbiomes of Rice Cultivars with High and Low Methane Emissions Reveals Differences in Abundance of Methanogenic Archaea and Putative Upstream Fermenters.
Article in mSystems, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
16 citing papers in PubMed, 60 citations in OpenAlex.
- Effect of Florpyrauxifen-Benzyl on Methane-Metabolizing Microbial Community in Rice Rhizosphere Soil.Microorganisms · 2026Article
- Controlled irrigation suppresses methane emissions by reshaping the rhizosphere microbiomes in rice.Microbiology spectrum · 2026Article
- Soil Bacteriome Shifts along a Cultivation Gradient in Southwestern Spanish Wetlands.Microbial ecology · 2025Article
- Advanced technologies for reducing greenhouse gas emissions from rice fields: Is hybrid rice the game changer?Plant communications · 2025Review
- Effects of Rice Root Development and Rhizosphere Soil on Methane Emission in Paddy Fields.Plants (Basel, Switzerland) · 2024Article
- Microbiome-Mediated Protection against Pathogens in Woody Plants.International journal of molecular sciences · 2023Review
- Asparagine Uptake: a Cellular Strategy ofApplied and environmental microbiology · 2023Article
- Comparative metagenomic analysis reveals rhizosphere microbial community composition and functions help protect grapevines against salt stress.Frontiers in microbiology · 2023Article
- Does genotypic diversity ofFrontiers in plant science · 2023Article
- Effect and Mechanism ofFrontiers in cellular and infection microbiology · 2022Article
- Influence of host genotype in establishing root associated microbiome ofFrontiers in microbiology · 2022Article
- Biological Control of Plant Diseases: An Evolutionary and Eco-Economic Consideration.Pathogens (Basel, Switzerland) · 2021Review
- Prolonged drought imparts lasting compositional changes to the rice root microbiome.Nature plants · 2021Article
- Bioactive diterpenoids impact the composition of the root-associated microbiome in maize (Zea mays).Scientific reports · 2021Article
- Compositional Shift of Bacterial, Archaeal, and Fungal Communities Is Dependent on Trophic Lifestyles in Rice Paddy Soil.Frontiers in microbiology · 2021Article
- Microbial Interactions Within Multiple-Strain Biological Control Agents Impact Soil-Borne Plant Disease.Frontiers in microbiology · 2020Review
Corrections and comments
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Authors and funding
8 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Rice cultivation worldwide accounts for ∼7 to 17% of global methane emissions. Methane cycling in rice paddies is a microbial process not only involving methane producers (methanogens) and methane metabolizers (methanotrophs) but also other microbial taxa that affect upstream processes related to methane metabolism. Rice cultivars vary in their rates of methane emissions, but the influence of rice genotypes on methane cycling microbiota has been poorly characterized. Here, we profiled the rhizosphere, rhizoplane, and endosphere microbiomes of a high-methane-emitting cultivar (Sabine) and a low-methane-emitting cultivar (CLXL745) throughout the growing season to identify variations in the archaeal and bacterial communities relating to methane emissions. The rhizosphere of the high-emitting cultivar was enriched in methanogens compared to that in the low emitter, whereas the relative abundances of methanotrophs between the cultivars were not significantly different. Further analysis of cultivar-sensitive taxa identified families enriched in the high emitter that are associated with methanogenesis-related processes. The high emitter had greater relative abundances of sulfate-reducing and iron-reducing taxa which peak earlier in the season than methanogens and are necessary to lower soil oxidation reduction potential before methanogenesis can occur. The high emitter also had a greater abundance of fermentative taxa which produce methanogenesis precursors (acetate, CO
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