Evidence map›Paper›PMID 32069885›Full record

ArticleMarine drugs2020

Identification of Prostaglandin Pathway in Dinoflagellates by Transcriptome Data Mining.

Valeria Di Dato, Adrianna Ianora, Giovanna Romano

Open access · goldAbstract read
In one paragraph

Article in Marine drugs, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Effects ofMarine drugs · 2025
    Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Valeria Di DatoDepartment of Marine Biotechnology, Stazione Zoologica Anton Dohrn Napoli, 80121 Napoli, Italy.ORCID 0000-0001-9720-6619
Adrianna IanoraDepartment of Marine Biotechnology, Stazione Zoologica Anton Dohrn Napoli, 80121 Napoli, Italy.
Giovanna RomanoDepartment of Marine Biotechnology, Stazione Zoologica Anton Dohrn Napoli, 80121 Napoli, Italy.ORCID 0000-0002-4898-7153
Stazione Zoologica Anton Dohrn · IT

Funding

Ministero dell'Ambiente e della Tutela del Territorio e del Mare PGR00765Regione Campania PG/2018/0494374
6 · The paper itself

Abstract

Dinoflagellates, a major class of marine eukaryote microalgae composing the phytoplankton, are widely recognised as producers of a large variety of toxic molecules, particularly neurotoxins, which can also act as potent bioactive pharmacological mediators. In addition, similarly to other microalgae, they are also good producers of polyunsaturated fatty acids (PUFAs), important precursors of key molecules involved in cell physiology. Among PUFA derivatives are the prostaglandins (Pgs), important physiological mediators in several physiological and pathological processes in humans, also used as "biological" drugs. Their synthesis is very expensive because of the elevated number of reaction steps required, thus the search for new Pgs production methods is of great relevance. One possibility is their extraction from microorganisms (e.g., diatoms), which have been proved to produce the same Pgs as humans. In the present study, we took advantage of the available transcriptomes for dinoflagellates in the iMicrobe database to search for the Pgs biosynthetic pathway using a bioinformatic approach. Here we show that dinoflagellates express nine Pg-metabolism related enzymes involved in both Pgs synthesis and reduction. Not all of the enzymes were expressed simultaneously in all the species analysed and their expression was influenced by culturing conditions, especially salinity of the growth medium. These results confirm the existence of a biosynthetic pathway for these important molecules in unicellular microalgae other than diatoms, suggesting a broad diffusion and conservation of the Pgs pathway, which further strengthen their importance in living organisms.

Indexed as

Biosynthetic PathwaysComputational BiologyComputer SimulationData MiningDinoflagellidaProstaglandinsTranscriptomeProstaglandinsbioactive compoundbioinformaticsdinoflagellatesFPKMmarine microalgaeMMETSP.prostaglandinsPUFAstresstranscriptomes

Identifiers

PMID32069885
PMCPMC7073720
OpenAlexW3005537664

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.