Evidence map›Paper›PMID 32068839›Full record

ArticleJournal of the American Medical Informatics Association : JAMIA2020

iDISK: the integrated DIetary Supplements Knowledge base.

Rubina F Rizvi, Jake Vasilakes, Terrence J Adam, Genevieve B Melton, Jeffrey R Bishop, Jiang Bian, Cui Tao, Rui Zhang

Abstract read
In one paragraph

Article in Journal of the American Medical Informatics Association : JAMIA, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Review
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  14. A conversational agent system for dietary supplements use.BMC medical informatics and decision making · 2022
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  16. Article
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  18. Review
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  20. Assessing the enrichment of dietary supplement coverage in the Unified Medical Language System.Journal of the American Medical Informatics Association : JAMIA · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Rubina F RizviInstitute for Health Informatics, University of Minnesota, Minneapolis, Minnesota, USA.
Jake VasilakesInstitute for Health Informatics, University of Minnesota, Minneapolis, Minnesota, USA.
Terrence J AdamInstitute for Health Informatics, University of Minnesota, Minneapolis, Minnesota, USA.
Genevieve B MeltonInstitute for Health Informatics, University of Minnesota, Minneapolis, Minnesota, USA.
Jeffrey R BishopDepartment of Experimental and Clinical Pharmacy, University of Minnesota, Minneapolis, Minnesota, USA.
Jiang BianDepartment of Health Outcomes and Biomedical Informatics, College of Medicine, University of Florida, Gainesville, Florida, USA.
Cui TaoSchool of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, Texas, USA.
Rui ZhangInstitute for Health Informatics, University of Minnesota, Minneapolis, Minnesota, USA.

Funding

University of Minnesota Clinical and Translational Science Institute (UMN CTSI)UL1TR002494 · NCATS · UNIVERSITY OF MINNESOTA · PI BLAZAR, BRUCE R, WEISDORF, DANIEL J · 2018 to 2022
$34.9M
A Translational Informatics Framework to Mine Efficacy and Safety of Dietary SupplementsR01AT009457 · NCCIH · UNIVERSITY OF MINNESOTA · PI RUI ZHANG · 2017 to 2026
$4.1M
NCATS NIH HHS UL1 TR002494NCCIH NIH HHS R01 AT009457
6 · The paper itself

Abstract

objectiveTo build a knowledge base of dietary supplement (DS) information, called the integrated DIetary Supplement Knowledge base (iDISK), which integrates and standardizes DS-related information from 4 existing resources. MATERIALS AND

methodsiDISK was built through an iterative process comprising 3 phases: 1) establishment of the content scope, 2) development of the data model, and 3) integration of existing resources. Four well-regarded DS resources were integrated into iDISK: The Natural Medicines Comprehensive Database, the "About Herbs" page on the Memorial Sloan Kettering Cancer Center website, the Dietary Supplement Label Database, and the Natural Health Products Database. We evaluated the iDISK build process by manually checking that the data elements associated with 50 randomly selected ingredients were correctly extracted and integrated from their respective sources.

resultsiDISK encompasses a terminology of 4208 DS ingredient concepts, which are linked via 6 relationship types to 495 drugs, 776 diseases, 985 symptoms, 605 therapeutic classes, 17 system organ classes, and 137 568 DS products. iDISK also contains 7 concept attribute types and 3 relationship attribute types. Evaluation of the data extraction and integration process showed average errors of 0.3%, 2.6%, and 0.4% for concepts, relationships and attributes, respectively.

conclusionWe developed iDISK, a publicly available standardized DS knowledge base that can facilitate more efficient and meaningful dissemination of DS knowledge.

Indexed as

Dietary SupplementsKnowledge BasesVocabulary, ControlledDatabases, FactualHumansProduct LabelingRxNormUnified Medical Language Systemdietary supplementsknowledge representationRxNormterminologyunified medical language system

Identifiers

PMID32068839
PMCPMC7075538

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.