Evidence map›Paper›PMID 32066874›Full record

ArticleThe ISME journal2020

Phylogenomic analysis of novel Diaforarchaea is consistent with sulfite but not sulfate reduction in volcanic environments on early Earth.

Daniel R Colman, Melody R Lindsay, Maximiliano J Amenabar, Maria C Fernandes-Martins, Eric R Roden, Eric S Boyd

Open access · hybridAbstract read
In one paragraph

Article in The ISME journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 43 citations in OpenAlex.

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  7. Characterization of DsrD and its interaction with the DsrAB dissimilatory sulfite reductase.Protein science : a publication of the Protein Society · 2024
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  19. The DsrD functional marker protein is an allosteric activator of the DsrAB dissimilatory sulfite reductase.Proceedings of the National Academy of Sciences of the United States of America · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Daniel R ColmanDepartment of Microbiology & Immunology, Montana State University, Bozeman, MT, 59717, USA.
Melody R LindsayDepartment of Microbiology & Immunology, Montana State University, Bozeman, MT, 59717, USA.
Maximiliano J AmenabarDepartment of Microbiology & Immunology, Montana State University, Bozeman, MT, 59717, USA.
Maria C Fernandes-MartinsDepartment of Microbiology & Immunology, Montana State University, Bozeman, MT, 59717, USA.
Eric R RodenDepartment of Geoscience, University of Wisconsin, Madison, WI, USA.
Eric S BoydDepartment of Microbiology & Immunology, Montana State University, Bozeman, MT, 59717, USA. eric.boyd@montana.edu.ORCID http://orcid.org/0000-0003-4436-5856
Montana State University · USNASA Astrobiology Institute · USUniversity of Wisconsin–Madison · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The origin(s) of dissimilatory sulfate and/or (bi)sulfite reducing organisms (SRO) remains enigmatic despite their importance in global carbon and sulfur cycling since at least 3.4 Ga. Here, we describe novel, deep-branching archaeal SRO populations distantly related to other Diaforarchaea from two moderately acidic thermal springs. Dissimilatory (bi)sulfite reductase homologs, DsrABC, encoded in metagenome assembled genomes (MAGs) from spring sediments comprise one of the earliest evolving Dsr lineages. DsrA homologs were expressed in situ under moderately acidic conditions. MAGs lacked genes encoding proteins that activate sulfate prior to (bi)sulfite reduction. This is consistent with sulfide production in enrichment cultures provided sulfite but not sulfate. We suggest input of volcanic sulfur dioxide to anoxic spring-water yields (bi)sulfite and moderately acidic conditions that favor its stability and bioavailability. The presence of similar volcanic springs at the time SRO are thought to have originated (>3.4 Ga) may have supplied (bi)sulfite that supported ancestral SRO. These observations coincide with the lack of inferred SO

Indexed as

ArchaeaEuryarchaeotaMetagenomeOxidation-ReductionOxidoreductases Acting on Sulfur Group DonorsPhylogenySulfatesSulfitesSulfurOxidoreductases Acting on Sulfur Group DonorsSulfatesSulfitesSulfur

Identifiers

PMID32066874
PMCPMC7174415
OpenAlexW3005766622

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.