Evidence map›Paper›PMID 32061894›Full record

ArticleMolecular plant2020

PCH1 and PCHL Directly Interact with PIF1, Promote Its Degradation, and Inhibit Its Transcriptional Function during Photomorphogenesis.

Mei-Chun Cheng, Beatrix Enderle, Praveen Kumar Kathare, Rafya Islam, Andreas Hiltbrunner, Enamul Huq

Open access · bronzeAbstract read
In one paragraph

Article in Molecular plant, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. COP1 controls light-dependent chromatin remodeling.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Phytochrome Signaling Networks.Annual review of plant biology · 2021
    Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Mei-Chun ChengMolecular Biosciences, University of Texas at Austin, NHB 2.616, Stop A5000, 100 East 24th Street, Austin, TX 78712-1095, USA.
Beatrix EnderleInstitute of Biology II, Faculty of Biology, University of Freiburg, Freiburg, Germany.
Praveen Kumar KathareMolecular Biosciences, University of Texas at Austin, NHB 2.616, Stop A5000, 100 East 24th Street, Austin, TX 78712-1095, USA.
Rafya IslamMolecular Biosciences, University of Texas at Austin, NHB 2.616, Stop A5000, 100 East 24th Street, Austin, TX 78712-1095, USA.
Andreas HiltbrunnerInstitute of Biology II, Faculty of Biology, University of Freiburg, Freiburg, Germany; Signalling Research Centres BIOSS and CIBSS, University of Freiburg, Freiburg, Germany.
Enamul HuqMolecular Biosciences, University of Texas at Austin, NHB 2.616, Stop A5000, 100 East 24th Street, Austin, TX 78712-1095, USA. Electronic address: huq@austin.utexas.edu.
The University of Texas at Austin · USUniversity of Freiburg · DE

Funding

Phytochrome-mediated light signaling in plantsR01GM114297 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI HUQ, ENAMUL · 2015 to 2018
$1.2M
NIGMS NIH HHS R01 GM114297
6 · The paper itself

Abstract

PHOTOPERIODIC CONTROL OF HYPOCOTYL 1 (PCH1) and PCH1-LIKE (PCHL) were shown to directly bind to phytochrome B (phyB) and suppress phyB thermal reversion, resulting in plants with dramatically enhanced light sensitivity. Here, we show that PCH1 and PCHL also positively regulate various light responses, including seed germination, hypocotyl gravitropism, and chlorophyll biosynthesis, by physically interacting with PHYTOCHROME INTERACTING FACTOR 1 (PIF1) and CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1). PCH1 and PCHL interact with PIF1 both in the dark and light, and regulate PIF1 abundance. Moreover, PCH1 and PCHL facilitate the physical interaction between phyB and PIF1 in vivo to promote the light-induced degradation of PIF1. PCH1 and PCHL also inhibit the DNA-binding ability of PIF1 to negatively regulate the expressions of PIF1 target genes. In addition, PCH1 and PCHL interact with COP1 and undergo degradation through the 26S proteasome pathway in the dark. Consistently, pch1 suppresses cop1 phenotype in darkness. Collectively, our study reveals a novel mechanism by which PCH1 and PCHL regulate diverse light responses not only by stabilizing phyB Pfr form but also by directly interacting with PIF1 and COP1, providing a molecular understanding of the control of hypocotyl growth by these proteins.

Indexed as

Transcription, GeneticArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsDarknessF-Box ProteinsPlant DevelopmentProtein BindingProteolysisTranscription FactorsUbiquitin-Protein LigasesArabidopsis ProteinsAt2g20180 protein, ArabidopsisAT2G32950 protein, ArabidopsisBasic Helix-Loop-Helix ProteinsF-Box ProteinsPHOTOPERIODIC CONTROL OF HYPOCOTYL 1 protein, ArabidopsisTranscription FactorsUbiquitin-Protein LigasesArabidopsisphotoperiodic growthphytochromephytochrome interacting factor (PIF)protein degradation

Identifiers

PMID32061894
PMCPMC7167218
OpenAlexW3005789536

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.