Evidence map›Paper›PMID 32060697›Full record

ArticleFamilial cancer2020

Mismatch repair gene pathogenic germline variants in a population-based cohort of breast cancer.

Tu Nguyen-Dumont, Jason A Steen, Ingrid Winship, Daniel J Park, Bernard J Pope, Fleur Hammet, Maryam Mahmoodi, Helen Tsimiklis, Derrick Theys, Mark Clendenning and 3 more

Abstract read
PubMed Publisher
In one paragraph

Article in Familial cancer, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. International journal of molecular sciences · 2021
    Article
  5. BeyondJournal of clinical medicine · 2020
    Article
  6. Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Tu Nguyen-DumontPrecision Medicine, School of Clinical Science at Monash Health, Monash University Clayton, Melbourne, VIC, 3168, Australia.ORCID 0000-0002-6217-0182
Jason A SteenPrecision Medicine, School of Clinical Science at Monash Health, Monash University Clayton, Melbourne, VIC, 3168, Australia.
Ingrid WinshipRoyal Melbourne Hospital, Parkville, VIC, Australia.ORCID 0000-0001-8535-6003
Daniel J ParkMelbourne Bioinformatics, The University of Melbourne, Melbourne, VIC, 3010, Australia.ORCID 0000-0002-6354-0931
Bernard J PopePrecision Medicine, School of Clinical Science at Monash Health, Monash University Clayton, Melbourne, VIC, 3168, Australia.ORCID 0000-0002-4840-1095
Fleur HammetPrecision Medicine, School of Clinical Science at Monash Health, Monash University Clayton, Melbourne, VIC, 3168, Australia.
Maryam MahmoodiPrecision Medicine, School of Clinical Science at Monash Health, Monash University Clayton, Melbourne, VIC, 3168, Australia.
Helen TsimiklisPrecision Medicine, School of Clinical Science at Monash Health, Monash University Clayton, Melbourne, VIC, 3168, Australia.
Derrick TheysPrecision Medicine, School of Clinical Science at Monash Health, Monash University Clayton, Melbourne, VIC, 3168, Australia.
Mark ClendenningDepartment of Clinical Pathology, The University of Melbourne, Melbourne, VIC, 3010, Australia.ORCID 0000-0001-9852-2103
Graham G GilesPrecision Medicine, School of Clinical Science at Monash Health, Monash University Clayton, Melbourne, VIC, 3168, Australia.ORCID 0000-0003-4946-9099
John L HopperCentre for Epidemiology and Biostatistics, School of Population and Global Health, University of Melbourne, Melbourne, VIC, 3010, Australia.
Melissa C SoutheyPrecision Medicine, School of Clinical Science at Monash Health, Monash University Clayton, Melbourne, VIC, 3168, Australia. Melissa.Southey@monash.edu.ORCID 0000-0002-6313-9005
The University of Melbourne · AUMonash Health · AUThe Royal Melbourne Hospital · AU

Funding

Breast Cancer Family Registry CohortUM1CA164920 · NCI · CANCER PREVENTION INSTIT OF CALIFORNIA · PI ANDRULIS, IRENE, BUYS, SAUNDRA S · 2012 to 2017
$12.7M
Genes, environment and breast cancer risk: The 15 year follow-up of the Prof-SC (Diversity Supplement)R01CA159868 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HOPPER, JOHN L, TERRY, MARY BETH · 2011 to 2015
$9.0M
NIH HHS R01CA159868NIH HHS UM1 CA164920
6 · The paper itself

Abstract

The advent of gene panel testing is challenging the previous practice of using clinically defined cancer family syndromes to inform single-gene genetic screening. Individual and family cancer histories that would have previously indicated testing of a single gene or a small number of related genes are now, increasingly, leading to screening across gene panels that contain larger numbers of genes. We have applied a gene panel test that included four DNA mismatch repair (MMR) genes (MLH1, MSH2, MSH6 and PMS2) to an Australian population-based case-control-family study of breast cancer. Altogether, eight pathogenic variants in MMR genes were identified: six in 1421 case-families (0.4%, 4 MSH6 and 2 PMS2) and two in 833 control-families (0.2%, one each of MLH1 and MSH2). This testing highlights the current and future challenges for clinical genetics in the context of anticipated gene panel-based population-based screening that includes the MMR genes. This testing is likely to provide additional opportunities for cancer prevention via cascade testing for Lynch syndrome and precision medicine for breast cancer treatment.

Indexed as

Germ-Line MutationBreast NeoplasmsCase-Control StudiesCohort StudiesColorectal Neoplasms, Hereditary NonpolyposisDNA-Binding ProteinsDNA Mismatch RepairFemaleGene Expression ProfilingGenetic Predisposition to DiseaseHumansMismatch Repair Endonuclease PMS2MutL Protein Homolog 1MutS Homolog 2 ProteinNew South WalesPedigreeDNA-Binding ProteinsG-T mismatch-binding proteinMismatch Repair Endonuclease PMS2MLH1 protein, humanMSH2 protein, humanMutL Protein Homolog 1MutS Homolog 2 ProteinPMS2 protein, humanBreast cancer predispositionDNA mismatch repairFamilial cancerGene panel testingLynch syndrome

Identifiers

PMID32060697
OpenAlexW3005562135

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.