Evidence map›Paper›PMID 32060267›Full record

ArticleNature communications2020

MYCN amplification and ATRX mutations are incompatible in neuroblastoma.

Maged Zeineldin, Sara Federico, Xiang Chen, Yiping Fan, Beisi Xu, Elizabeth Stewart, Xin Zhou, Jongrye Jeon, Lyra Griffiths, Rosa Nguyen and 27 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
8.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 124 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. ATRX: From Chromatin Remodeling to Disease.Genesis (New York, N.Y. : 2000) · 2025
    Review
  12. Article
  13. Article
  14. Transcription-Replication Conflicts: Unlocking New Frontiers in Cancer.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  15. Article
  16. Review
  17. The Involvement of CSRP1 in Neuroblastoma Differentiation and Apoptosis Impacting Tumor-Suppressive Therapeutic Responses.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  18. Article
  19. Article
  20. Article

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

37 authors at 7 institutions in 1 country.

Maged Zeineldin *Department of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Sara Federico *Department of Oncology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Xiang Chen *Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.ORCID http://orcid.org/0000-0002-2499-8261
Yiping FanDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Beisi XuDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.ORCID http://orcid.org/0000-0003-0099-858X
Elizabeth StewartDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Xin ZhouDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Jongrye JeonDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Lyra GriffithsDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Rosa NguyenDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Jackie NorrieDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
John EastonDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Heather MulderDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.ORCID http://orcid.org/0000-0003-2024-9498
Donald YergeauDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Yanling LiuDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Jianrong WuDepartment of Biostatistics, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Collin Van RynChildren's Oncology Group Statistics and Data Center, Department of Biostatistics, University of Florida, Gainesville, FlL, 32607, USA.
Arlene NaranjoChildren's Oncology Group Statistics and Data Center, Department of Biostatistics, University of Florida, Gainesville, FlL, 32607, USA.
Michael D HogartyDivision of Oncology, Children's Hospital of Philadelphia, Philadelphia, PA, 19104, USA.
Marcin M KamińskiDepartment of Immunology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.ORCID http://orcid.org/0000-0002-9026-0185
Marc ValentineCytogenetics Shared Resource, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Shondra M Pruett-MillerCenter for Advanced Genome Engineering, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.ORCID http://orcid.org/0000-0002-3793-585X
Alberto PappoDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Jinghui ZhangDepartment of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.ORCID http://orcid.org/0000-0003-3350-9682
Michael R ClayDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.ORCID http://orcid.org/0000-0003-1659-8927
Armita BahramiDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Peter VogelDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.ORCID http://orcid.org/0000-0002-7535-0545
Seungjae LeeDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Anang ShelatDepartment of Chemical Biology and Therapeutics St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.ORCID http://orcid.org/0000-0002-6266-2910
Jay F SarthyBasic Science Division, Fred Hutchinson Cancer Research Center, Seattle, WA, 98109, USA.
Michael P MeersBasic Science Division, Fred Hutchinson Cancer Research Center, Seattle, WA, 98109, USA.
Rani E GeorgeDepartment of Hematology/Oncology, Dana Farber Cancer Institute, Boston, MA, 02215, USA.
Elaine R MardisThe Institute for Genomic Medicine, Nationwide Children's Hospital, Columbus, OH, 43205, USA.ORCID http://orcid.org/0000-0002-5892-1553
Richard K WilsonThe Institute for Genomic Medicine, Nationwide Children's Hospital, Columbus, OH, 43205, USA.
Steven HenikoffBasic Science Division, Fred Hutchinson Cancer Research Center, Seattle, WA, 98109, USA.
James R DowningDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Michael A DyerDepartment of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA. michael.dyer@stjude.org.
St. Jude Children's Research Hospital · USFred Hutch Cancer Center · USNationwide Children's Hospital · USUniversity of Florida · USChildren's Hospital of Philadelphia · USDana-Farber Cancer Institute · USHoward Hughes Medical Institute · US

Funding

NCTN BIQSFP ANBL1531 (NRT)U10CA180886 · NCI · PUBLIC HEALTH INSTITUTE · PI Douglas S. Hawkins · 2014 to 2026
$390.6M
Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
COG SDMC - Statistics CoreU10CA180899 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI TODD A ALONZO · 2014 to 2026
$132.8M
Proliferation Control in the Retina: The Rb FamilyR01EY014867 · NEI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI DYER, MICHAEL A · 2003 to 2012
$4.5M
The ALK receptor tyrosine kinase as a therapeutic target in neuroblastomaR01CA148688 · NCI · DANA-FARBER CANCER INST · PI GEORGE, RANI E. · 2011 to 2021
$4.1M
Proliferation and Differentiation of Retinal Stem CellsR01EY018599 · NEI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI DYER, MICHAEL A · 2008 to 2011
$2.5M
Molecular Targeted Therapy for RetinoblastomaR01CA168875 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI DYER, MICHAEL A · 2012 to 2016
$1.8M
NCI NIH HHS P30 CA021765NCI NIH HHS R01 CA148688NCI NIH HHS R01 CA168875NCI NIH HHS U10 CA180886NCI NIH HHS U10 CA180899NEI NIH HHS R01 EY014867NEI NIH HHS R01 EY018599
6 · The paper itself

Abstract

Aggressive cancers often have activating mutations in growth-controlling oncogenes and inactivating mutations in tumor-suppressor genes. In neuroblastoma, amplification of the MYCN oncogene and inactivation of the ATRX tumor-suppressor gene correlate with high-risk disease and poor prognosis. Here we show that ATRX mutations and MYCN amplification are mutually exclusive across all ages and stages in neuroblastoma. Using human cell lines and mouse models, we found that elevated MYCN expression and ATRX mutations are incompatible. Elevated MYCN levels promote metabolic reprogramming, mitochondrial dysfunction, reactive-oxygen species generation, and DNA-replicative stress. The combination of replicative stress caused by defects in the ATRX-histone chaperone complex, and that induced by MYCN-mediated metabolic reprogramming, leads to synthetic lethality. Therefore, ATRX and MYCN represent an unusual example, where inactivation of a tumor-suppressor gene and activation of an oncogene are incompatible. This synthetic lethality may eventually be exploited to improve outcomes for patients with high-risk neuroblastoma.

Indexed as

AnimalsChild, PreschoolCohort StudiesFemaleGene AmplificationHumansInfantMaleMiceMitochondriaMutationNeuroblastomaN-Myc Proto-Oncogene ProteinReactive Oxygen SpeciesX-linked Nuclear ProteinN-Myc Proto-Oncogene ProteinReactive Oxygen SpeciesX-linked Nuclear Protein

Identifiers

PMID32060267
PMCPMC7021759
OpenAlexW3005974465

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.