Evidence map›Paper›PMID 32060122›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

A nanobody targeting the LIN28:let-7 interaction fragment of TUT4 blocks uridylation of let-7.

Chunxiao Yu, Longfei Wang, R Grant Rowe, Areum Han, Wanying Ji, Conor McMahon, Alexander S Baier, Yu-Chung Huang, William Marion, Daniel S Pearson and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Evolution of nanobodies specific for BCL11A.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Exploring cellular biochemistry with nanobodies.The Journal of biological chemistry · 2020
    Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Chunxiao YuDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115.
Longfei WangDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115.
R Grant RoweStem Cell Program, Boston Children's Hospital, Boston, MA 02115.
Areum HanStem Cell Program, Boston Children's Hospital, Boston, MA 02115.
Wanying JiDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115.
Conor McMahonDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115.
Alexander S BaierDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115.
Yu-Chung HuangStem Cell Program, Boston Children's Hospital, Boston, MA 02115.
William MarionStem Cell Program, Boston Children's Hospital, Boston, MA 02115.
Daniel S PearsonStem Cell Program, Boston Children's Hospital, Boston, MA 02115.
Andrew C KruseDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115.ORCID 0000-0002-1467-1222
George Q DaleyDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115.
Hao WuDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115; hao.wu@childrens.harvard.edu piotr.sliz@childrens.harvard.edu.
Piotr SlizDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115; hao.wu@childrens.harvard.edu piotr.sliz@childrens.harvard.edu.ORCID 0000-0002-6522-0835
Boston Children's Hospital · USHarvard University · US

Funding

Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
Structural and Mechanistic Studies of Regulation of let-7 biogenesis by Lin28'R01CA163647 · NCI · HARVARD MEDICAL SCHOOL · PI SLIZ, PIOTR · 2012 to 2016
$1.7M
Role of the Lin28b/let-7 axis in the maturation of hematopoietic progenitor cellsK08DK114527 · NIDDK · BOSTON CHILDREN'S HOSPITAL · PI ROWE, ROBERT GRANT · 2017 to 2021
$704k
NCI NIH HHS R01 CA163647NIDDK NIH HHS K08 DK114527NIGMS NIH HHS T32 GM007753
6 · The paper itself

Abstract

The LIN28:pre-let-7:TUTase ternary complex regulates pluripotency and oncogenesis by controlling processing of the let-7 family of microRNAs. The complex oligouridylates the 3' ends of pre-let-7 molecules, leading to their degradation via the DIS3L2 exonuclease. Previous studies suggest that components of this complex are potential therapeutic targets in malignancies that aberrantly express LIN28. In this study we developed a functional epitope selection approach to identify nanobody inhibitors of the LIN28:pre-let-7:TUT4 complex. We demonstrate that one of the identified nanobodies, Nb-S2A4, targets the 106-residue LIN28:let-7 interaction (LLI) fragment of TUT4. Nb-S2A4 can effectively inhibit oligouridylation and monouridylation of pre-let-7g in vitro. Expressing Nb-S2A4 allows maturation of the let-7 species in cells expressing LIN28, highlighting the therapeutic potential of targeting the LLI fragment.

Indexed as

RNA 3' End ProcessingAnimalsBinding SitesDNA-Binding ProteinsHEK293 CellsHeLa CellsHumansMiceMicroRNAsProtein BindingRNA-Binding ProteinsRNA StabilitySf9 CellsSingle-Domain AntibodiesSpodopteraDNA-Binding ProteinsLin28A protein, humanMicroRNAsmirnlet7 microRNA, humanRNA-Binding ProteinsSingle-Domain AntibodiesTUT4 protein, humanlet-7LIN28nanobodyoligouridylationTUT4

Identifiers

PMID32060122
PMCPMC7060709
OpenAlexW3005595143

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.