Evidence map›Paper›PMID 32060100›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2020

The Immune Microenvironment and Neoantigen Landscape of Aggressive Salivary Gland Carcinomas Differ by Subtype.

Maximilian Linxweiler, Fengshen Kuo, Nora Katabi, Mark Lee, Zaineb Nadeem, Martin G Dalin, Vladimir Makarov, Diego Chowell, Snjezana Dogan, Ian Ganly and 6 more

Open access · hybridAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed, 1 pooled it
6.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 1 synthesis or guideline pooled it, 119 citations in OpenAlex.

  1. Pooled it
  2. Axitinib plus Avelumab in Recurrent/Metastatic Adenoid Cystic Carcinoma: Biomarker Analysis and Updated Results of the Phase II Trial.Clinical cancer research : an official journal of the American Association for Cancer Research · 2026
    Trial
  3. Phase 2 Trial of Regorafenib in Recurrent/Metastatic Adenoid Cystic Carcinoma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2024
    Trial
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  8. Article
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  16. Molecular pathology of adenoid cystic carcinoma.Histology and histopathology · 2025
    Review
  17. Article
  18. Article
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  20. Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 1 institution in 2 countries.

Maximilian LinxweilerHuman Oncology and Pathology Program, Memorial Sloan Kettering Cancer Center, New York, New York.
Fengshen KuoImmunogenomics and Precision Oncology Platform, Memorial Sloan Kettering Cancer Center, New York, New York.ORCID 0000-0003-1797-2896
Nora KatabiDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York.
Mark LeeHuman Oncology and Pathology Program, Memorial Sloan Kettering Cancer Center, New York, New York.
Zaineb NadeemHuman Oncology and Pathology Program, Memorial Sloan Kettering Cancer Center, New York, New York.
Martin G DalinHuman Oncology and Pathology Program, Memorial Sloan Kettering Cancer Center, New York, New York.ORCID 0000-0002-7516-0004
Vladimir MakarovHuman Oncology and Pathology Program, Memorial Sloan Kettering Cancer Center, New York, New York.
Diego ChowellHuman Oncology and Pathology Program, Memorial Sloan Kettering Cancer Center, New York, New York.
Snjezana DoganDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York.
Ian GanlyDepartment of Surgery, Memorial Sloan Kettering Cancer Center, New York, New York.
A Ari HakimiDepartment of Surgery, Memorial Sloan Kettering Cancer Center, New York, New York.
Richard J WongDepartment of Surgery, Memorial Sloan Kettering Cancer Center, New York, New York.
Nadeem RiazImmunogenomics and Precision Oncology Platform, Memorial Sloan Kettering Cancer Center, New York, New York.
Alan L HoDepartment of Medicine, Memorial Sloan Kettering Cancer Center, New York, New York.
Timothy A ChanHuman Oncology and Pathology Program, Memorial Sloan Kettering Cancer Center, New York, New York. morrisl@mskcc.org chant@mskcc.org.
Luc G T MorrisHuman Oncology and Pathology Program, Memorial Sloan Kettering Cancer Center, New York, New York. morrisl@mskcc.org chant@mskcc.org.
Memorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
TOWARDS PRECISION IMMUNO-ONCOLOGY: UNRAVELING THE GENOMIC DETERMINANTS AND MECHANISMS UNDERLYING IMMUNOTHERAPY EFFICACY AND RESISTANCER35CA232097 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI CHAN, TIMOTHY AN-THY · 2018 to 2024
$7.0M
Elucidating genetics of response to immune checkpoint blockade in lung cancerR01CA205426 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CHAN, TIMOTHY AN-THY, RIZVI, NAIYER A · 2017 to 2021
$3.2M
Identifying and targeting neoantigens in aggressive salivary carcinomasR01DE027738 · NIDCR · SLOAN-KETTERING INST CAN RESEARCH · PI CHAN, TIMOTHY AN-THY, HO, ALAN L. · 2018 to 2022
$2.8M
Functionalizing recurrent FAT1 mutations and deletions in oral cancerK08DE024774 · NIDCR · SLOAN-KETTERING INST CAN RESEARCH · PI MORRIS, LUC GORDON TRANG · 2014 to 2018
$682k
NCI NIH HHS P30 CA008748NCI NIH HHS R01 CA205426NCI NIH HHS R35 CA232097NIDCR NIH HHS K08 DE024774NIDCR NIH HHS R01 DE027738
6 · The paper itself

Abstract

purposeSalivary gland carcinomas (SGC) are rare, aggressive cancers with high rates of recurrence and distant metastasis. These factors, and a lack of active systemic therapies, contribute to poor clinical outcome. Response rates with immune checkpoint blockade have been low, although clinical data remain sparse. To improve the efficacy of therapies, a more comprehensive understanding of relevant molecular alterations and immunologic processes is needed. EXPERIMENTAL

designTo characterize the immune microenvironment and neoantigen landscape of SGCs, we performed RNA sequencing (RNA-seq) in 76 tumors representing the three most lethal histologies: adenoid cystic carcinoma (ACC), myoepithelial carcinoma (MECA), and salivary duct carcinoma (SDC). We analyzed transcriptomic profiles, tumor-infiltrating immune cell populations, and measures of T-cell activation/dysfunction. In 37 cases also undergoing exome sequencing, we analyzed somatic mutations and neoantigens.

resultsSDCs exhibited high levels of immune infiltration, with corresponding higher levels of T-cell dysfunction, and higher mutational load. In contrast, ACCs were characterized by an immune-excluded microenvironment, the presence of M2-polarized macrophages and myeloid-derived suppressor cells, and very low mutational load. MECAs were more heterogeneous, with both immune-low and immune-high phenotypes represented. Across all SGCs, levels of immune infiltration were associated with mutation- and fusion-derived neoantigens, and with aggressive clinical behavior.

conclusionsThese findings provide new insights into the immune microenvironment and neoantigen landscape of SGCs, showing that mechanisms of immune escape appear to differ by histology. These data nominate potential immunologic vulnerabilities and may help guide the next steps of investigation in precision immunotherapy for these difficult-to-treat cancers.

Indexed as

MutationAdultAgedAged, 80 and overAntigens, NeoplasmAntineoplastic Combined Chemotherapy ProtocolsBiomarkers, TumorExome SequencingFemaleFollow-Up StudiesGene Expression Regulation, NeoplasticHumansImmunohistochemistryLymphocytes, Tumor-InfiltratingMaleMiddle AgedAntigens, NeoplasmBiomarkers, Tumor

Identifiers

PMID32060100
PMCPMC7918996
OpenAlexW3006241692

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.