Evidence map›Paper›PMID 32055028›Full record

ArticleThe ISME journal2020

Comparative genomics: Dominant coral-bacterium Endozoicomonas acroporae metabolizes dimethylsulfoniopropionate (DMSP).

Kshitij Tandon, Chih-Ying Lu, Pei-Wen Chiang, Naohisa Wada, Shan-Hua Yang, Ya-Fan Chan, Ping-Yun Chen, Hsiao-Yu Chang, Yu-Jing Chiou, Ming-Shean Chou and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The ISME journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed, 1 pooled it
15.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 1 synthesis or guideline pooled it, 156 citations in OpenAlex.

  1. Pooled it
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  15. Genomic insights into hostMicrobial genomics · 2025
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5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 1 country.

Kshitij TandonBiodiversity Research Center, Academia Sinica, Taipei, 115, Taiwan.ORCID http://orcid.org/0000-0003-3022-0808
Chih-Ying Lu *Biodiversity Research Center, Academia Sinica, Taipei, 115, Taiwan.
Pei-Wen Chiang *Biodiversity Research Center, Academia Sinica, Taipei, 115, Taiwan.
Naohisa WadaBiodiversity Research Center, Academia Sinica, Taipei, 115, Taiwan.ORCID http://orcid.org/0000-0001-5949-9115
Shan-Hua YangInstitute of Fisheries Science, National Taiwan University, Taipei, 10617, Taiwan.
Ya-Fan ChanBiodiversity Research Center, Academia Sinica, Taipei, 115, Taiwan.
Ping-Yun ChenInstitute of Environmental Engineering, National Sun Yat-sen University, Kaohsiung, 80424, Taiwan.
Hsiao-Yu ChangInstitute of Environmental Engineering, National Sun Yat-sen University, Kaohsiung, 80424, Taiwan.
Yu-Jing ChiouBiodiversity Research Center, Academia Sinica, Taipei, 115, Taiwan.
Ming-Shean ChouInstitute of Environmental Engineering, National Sun Yat-sen University, Kaohsiung, 80424, Taiwan.
Wen-Ming ChenLaboratory of Microbiology, Department of Seafood Science, National Kaohsiung Marine University, No. 142, Hai-Chuan Rd, Nan-Tzu, Kaohsiung City, 811, Taiwan.
Sen-Lin TangBiodiversity Research Center, Academia Sinica, Taipei, 115, Taiwan. sltang@gate.sinica.edu.tw.ORCID http://orcid.org/0000-0002-5852-972X
Biodiversity Research Center, Academia Sinica · TWNational Sun Yat-sen University · TWNational Taiwan University · TWInstitute of Information Science, Academia Sinica · TWNational Kaohsiung Marine University · TWNational Tsing Hua University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dominant coral-associated Endozoicomonas bacteria species are hypothesized to play a role in the coral sulfur cycle by metabolizing dimethylsulfoniopropionate (DMSP) into dimethylsulfide (DMS); however, no sequenced genome to date harbors genes for this process. In this study, we assembled high-quality (>95% complete) draft genomes of strains of the recently added species Endozoicomonas acroporae (Acr-14

Indexed as

AnimalsAnthozoaBacteriaCarbon-Sulfur LyasesGammaproteobacteriaGenomicsSulfidesSulfonium CompoundsSulfurCarbon-Sulfur Lyasesdimethylpropiothetindimethyl sulfidedimethylsulfoniopropionate lyaseSulfidesSulfonium CompoundsSulfur

Identifiers

PMID32055028
PMCPMC7174347
OpenAlexW3006490060

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.