Evidence map›Paper›PMID 32054482›Full record

ArticleRespiratory research2020

Frequent mutation of hypoxia-related genes in persistent pulmonary hypertension of the newborn.

Mingbang Wang, Deyi Zhuang, Mei Mei, Haiyan Ma, Zixiu Li, Fusheng He, Guoqiang Cheng, Guang Lin, Wenhao Zhou

Open access · goldAbstract read
In one paragraph

Article in Respiratory research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Molecular genetics of pulmonary hypertension in children.Current opinion in genetics & development · 2022
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Mingbang WangShanghai Key Laboratory of Birth Defects, National Health Commision (NHC) Key Laboratory of Neonatal Diseases, Division of Neonatology, National Center for Children's Health, Children's Hospital of Fudan University, Shanghai, 201102, China. Mingbang.wang.bgi@qq.com.ORCID http://orcid.org/0000-0002-5989-5377
Deyi ZhuangXiamen Key Laboratory of Neonatal Diseases, Neonatal Medical Center, Xiamen Children's Hospital, Children's Hospital of Fudan University (Xiamen Branch), Xiamen, 361006, Fujian, China.
Mei MeiDivision of Pulmonology, Children's Hospital of Fudan University, Shanghai, 201102, China.
Haiyan MaZhuhai Maternal and Children's Hospital, Zhuhai, 519001, Guangdong, China.
Zixiu LiDepartment of Population and Quantitative Health Sciences, University of Massachusetts Medical School, Worcester, MA, 01655, USA.
Fusheng HeImunobio, Shenzhen, Guangdong, China.
Guoqiang ChengDivision of Neonatology, Children's Hospital of Fudan University, Shanghai, 201102, China.
Guang LinZhuhai Maternal and Children's Hospital, Zhuhai, 519001, Guangdong, China. linguang_9999@126.com.
Wenhao ZhouShanghai Key Laboratory of Birth Defects, National Health Commision (NHC) Key Laboratory of Neonatal Diseases, Division of Neonatology, National Center for Children's Health, Children's Hospital of Fudan University, Shanghai, 201102, China. zhouwenhao@fudan.edu.cn.
Children's Hospital of Fudan University · CNBGI Group (China) · CNChildren’s Hospital of Fudan University Xiamen Branch · CNUniversity of Massachusetts Chan Medical School · USZhuhai People's Hospital · CN

Funding

Young Scientists Fund No.81701351
6 · The paper itself

Abstract

aimsPersistent pulmonary hypertension of the newborn (PPHN) is characterized by sustained high levels of pulmonary vascular resistance after birth with etiology unclear; Arterial blood oxygen saturation of Tibetan newborns at high latitudes is higher than that of Han newborns at low latitudes, suggesting that genetic adaptation may allow sufficient oxygen to confer Tibetan populations with resistance to pulmonary hypertension; We have previously identified genetic factors related to PPHN through candidate gene sequencing; In this study, we first performed whole exome sequencing in PPHN patients to screen for genetic-related factors. METHODS AND

resultsIn this two-phase genetic study, we first sequenced the whole exome of 20 Tibetan PPHN patients and compared it with the published genome sequences of 50 healthy high-altitude Tibetanshypoxia-related genes, a total of 166 PPHN-related variants were found, of which 49% were from 43 hypoxia-related genes; considering many studies have shown that the differences in the genetic background between Tibet and Han are characterized by hypoxia-related genetic polymorphisms, so it is necessary to further verify whether the association between hypoxia-related variants and PPHN is independent of high-altitude life. During the validation phase, 237 hypoxia-related genes were sequenced in another 80 Han PPHN patients living in low altitude areas, including genes at the discovery stage and known hypoxia tolerance, of which 413 variants from 127 of these genes were shown to be significantly associated with PPHN.hypoxia-related genes.

conclusionsOur results indicates that the association of hypoxia-related genes with PPHN does not depend on high-altitude life, at the same time, 21 rare mutations associated with PPHN were also found, including three rare variants of the tubulin tyrosine ligase-like family member 3 gene (TTLL3:p.E317K, TTLL3:p.P777S) and the integrin subunit alpha M gene (ITGAM:p.E1071D). These novel findings provide important information on the genetic basis of PPHN.

Indexed as

Case-Control StudiesFemaleGenetic VariationHumansHypertension, PulmonaryHypoxiaHypoxia-Inducible Factor 1, alpha SubunitInfant, NewbornMaleMutationPeptide SynthasesPersistent Fetal Circulation SyndromeTibetHIF1A protein, humanHypoxia-Inducible Factor 1, alpha SubunitPeptide Synthasestubulin polyglutamylaseHypoxia tolerancePersistent pulmonary hypertension of the newbornTarget region sequencingWhole exome sequencing

Identifiers

PMID32054482
PMCPMC7020588
OpenAlexW3006335748

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.