Evidence map›Paper›PMID 32053680›Full record

ArticlePloS one2020

The crowding dynamics of the motor protein kinesin-II.

Vandana S Kushwaha, Seyda Acar, Daniël M Miedema, Dmitry V Denisov, Peter Schall, Erwin J G Peterman

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Vandana S KushwahaDepartment of Physics and Astronomy and LaserLaB, Vrije Universiteit, Amsterdam, Netherlands.
Seyda AcarDepartment of Physics and Astronomy and LaserLaB, Vrije Universiteit, Amsterdam, Netherlands.
Daniël M MiedemaInstitute of Physics, University of Amsterdam, Amsterdam, Netherlands.
Dmitry V DenisovInstitute of Physics, University of Amsterdam, Amsterdam, Netherlands.
Peter SchallInstitute of Physics, University of Amsterdam, Amsterdam, Netherlands.
Erwin J G PetermanDepartment of Physics and Astronomy and LaserLaB, Vrije Universiteit, Amsterdam, Netherlands.ORCID 0000-0003-1058-249X
Vrije Universiteit Amsterdam · NLUniversity of Amsterdam · NLAmsterdam UMC Location University of Amsterdam · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intraflagellar transport (IFT) in C. elegans chemosensory cilia is an example of functional coordination and cooperation of two motor proteins with distinct motility properties operating together in large groups to transport cargoes: a fast and processive homodimeric kinesin-2, OSM-3, and a slow and less processive heterotrimeric kinesin-2, kinesin-II. To study the mechanism of the collective dynamics of kinesin-II of C. elegans cilia in an in vitro system, we used Total Internal Reflection Fluorescence microscopy to image the motility of truncated, heterodimeric kinesin-II constructs at high motor densities. Using an analysis technique based on correlation of the fluorescence intensities, we extracted quantitative motor parameters, such as motor density, velocity and average run length, from the image. Our experiments and analyses show that kinesin-II motility parameters are far less affected by (self) crowding than OSM-3. Our observations are supported by numerical calculations based on the TASEP-LK model (Totally Asymmetric Simple Exclusion Process-Langmuir Kinetics). From a comparison of data and modelling of OSM-3 and kinesin-II, a general picture emerges of the collective dynamics of the kinesin motors driving IFT in C. elegans chemosensory cilia and the way the motors deal with crowding.

Indexed as

AnimalsBiological TransportCaenorhabditis elegansCaenorhabditis elegans ProteinsCiliaDyneinsFlagellaKinesinsKineticsMolecular Motor ProteinsMyosinsProtein TransportCaenorhabditis elegans ProteinsDyneinskinesin-IIKinesinsMolecular Motor ProteinsMyosins

Identifiers

PMID32053680
PMCPMC7018031
OpenAlexW3005869632

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.