Evidence map›Paper›PMID 32053251›Full record

ReviewPhysiologia plantarum2020

The bHLH network underlying plant shade-avoidance.

Sara Buti, Scott Hayes, Ronald Pierik

Open access · hybridAbstract readReview
In one paragraph

Review in Physiologia plantarum, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
8.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
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  5. Review
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  14. High-resolution genetic linkage map and height-related QTLs in an oil palm (Physiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Article
  15. Article
  16. Shade avoidance syndrome in soybean and ideotype toward shade tolerance.Molecular breeding : new strategies in plant improvement · 2023
    Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Sara ButiPlant Ecophysiology, Institute of Environmental Biology, Utrecht University, Utrecht, 3584 CH, The Netherlands.ORCID https://orcid.org/0000-0003-4879-2265
Scott HayesCentro Nacional de Biotecnología, CSIC, Madrid, 28049, Spain.ORCID https://orcid.org/0000-0001-8943-6238
Ronald PierikPlant Ecophysiology, Institute of Environmental Biology, Utrecht University, Utrecht, 3584 CH, The Netherlands.ORCID https://orcid.org/0000-0002-5320-6817
Utrecht University · NLCentro Nacional de Biotecnología · ES

Funding

Dutch Research Council Vici grant nr. 865.17.002Horizon 2020 Framework Programme MSCA 792624
6 · The paper itself

Abstract

Shade is a potential threat to many plant species. When shade-intolerant plants detect neighbours, they elongate their stems and leaves in an effort to maximise their light capture. This developmental programme, known as 'shade-avoidance' is tightly controlled by specialised photoreceptors and a suite of transcriptional regulators. The basic helix-loop-helix (bHLH) family of transcription factors are particularly important for shade-induced elongation. In recent years, it has become apparent that many members of this family heterodimerise and that together they form a complex regulatory network. This review summarises recent work into the structure of the bHLH network and how it regulates elongation growth. In addition to this, we highlight how photoreceptors modulate the function of the network via direct interaction with transcription factors. It is hoped that the information integrated in this review will provide a useful theoretical framework for future studies on the molecular basis of shade-avoidance in plants.

Indexed as

ArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsGene Expression Regulation, PlantLightArabidopsis ProteinsBasic Helix-Loop-Helix Proteins

Identifiers

PMID32053251
PMCPMC7383782
OpenAlexW3006452233

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.