Evidence map›Paper›PMID 32049255›Full record

ArticleRevista do Instituto de Medicina Tropical de Sao Paulo2020

Molecular characterization of pre-extensive drug resistant Mycobacterium tuberculosis in Northeast Brazil.

Thales Alves Campelo, Luana Nepomuceno Costa Lima, Karla Valéria Batista Lima, Caroliny Soares Silva, Marília Lima da Conceição, José Antonio Pereira Barreto, Aquiles Paulino Peres Mota, Soraya de Oliveira Sancho, Cristiane Cunha Frota

Open access · diamondAbstract readComparative Study
In one paragraph

Article in Revista do Instituto de Medicina Tropical de Sao Paulo, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.1field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. Prevalence ofJournal of clinical tuberculosis and other mycobacterial diseases · 2023
    Article
  4. Article
  5. Revisiting the methods for detectingAccess microbiology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Thales Alves CampeloUniversidade Federal do Ceará , Faculdade de Medicina, Departamento de Patologia e Medicina Legal , Fortaleza , Ceará , Brazil.ORCID http://orcid.org/0000-0002-8480-430X
Luana Nepomuceno Costa LimaInstituto Evandro Chagas , Seção de Bacteriologia e Micologia, Ananindeua , Pará , Brazil.ORCID http://orcid.org/0000-0002-0642-4248
Karla Valéria Batista LimaInstituto Evandro Chagas , Seção de Bacteriologia e Micologia, Ananindeua , Pará , Brazil.ORCID http://orcid.org/0000-0001-5807-0392
Caroliny Soares SilvaUniversidade Federal do Ceará , Faculdade de Medicina, Departamento de Patologia e Medicina Legal , Fortaleza , Ceará , Brazil.ORCID http://orcid.org/0000-0002-8272-2909
Marília Lima da ConceiçãoUniversidade do Estado do Pará , Programa de Pós-Graduação em Biologia Parasitária na Amazônia , Belém , Pará , Brazil.ORCID http://orcid.org/0000-0002-3162-142X
José Antonio Pereira BarretoSecretaria de Saúde do Município de Fortaleza , Fortaleza , Ceará , Brazil.ORCID http://orcid.org/0000-0001-8161-6509
Aquiles Paulino Peres MotaUniversidade Federal do Ceará , Faculdade de Medicina, Departamento de Patologia e Medicina Legal , Fortaleza , Ceará , Brazil.ORCID http://orcid.org/0000-0002-5595-5723
Soraya de Oliveira SanchoUniversidade Federal do Ceará , Faculdade de Medicina, Departamento de Patologia e Medicina Legal , Fortaleza , Ceará , Brazil.ORCID http://orcid.org/0000-0002-2797-8389
Cristiane Cunha FrotaUniversidade Federal do Ceará , Faculdade de Medicina, Departamento de Patologia e Medicina Legal , Fortaleza , Ceará , Brazil.ORCID http://orcid.org/0000-0003-0018-7736
Universidade Federal do Ceará · BRUniversidade do Estado do Pará · BRSecretaria da Saúde · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Fortaleza, the capital of Ceara State, Brazil, the detection rate of tuberculosis (TB) in 2018 was 65.5/100,000 inhabitants with a cure rate of 59.1%, which is higher than the country average. This study investigated the risk factors associated with drug-resistant tuberculosis (DR-TB) and identified the drug-resistance phenotype and resistance-conferring mutations. The geographic distribution of DR-TB in Fortaleza, Brazil, was also determined. From March 2017 to February 2018, 41 DR-TB isolates and 69 drug-susceptible pulmonary TB isolates were obtained from patients seen at a referral hospital in Fortaleza, Brazil. Samples were subjected to phenotypic and genetic analysis of resistance; the spatial distribution of the participants was also analyzed. Primary resistance was high (50.9%) among participants. The following risk factors for DR were identified: being female ( p = 0.03), having diabetes ( p < 0.01), history of previous TB disease ( p < 0.01), and the number of intra-domiciliary contacts ( p < 0.01). Analysis by multiplex allele-specific polymerase chain reaction detected mutations in the genes katG (65.8%) , rpoB (43.9%), inhA promoter (14.6%), and gyrA (9.8%). Sequencing identified mutations in the the genes katG (75.6%), inhA promoter (19.5%), rpoB (85.4%), and gyrA (100%). There was no mutation in the rrs gene. Spatial analysis showed DR-TB isolates distributed in areas of low socioeconomic status in the city of Fortaleza. Our results emphasized the importance of detecting resistance to TB drugs. The resistance found in the gene gyrA is of concern due to the high number of pre-extensive DR-TB cases in Fortaleza.

Indexed as

AdultAntitubercular AgentsCase-Control StudiesDrug Resistance, Multiple, BacterialFemaleGenotypeGeography, MedicalHumansMicrobial Sensitivity TestsMiddle AgedMultiplex Polymerase Chain ReactionMutationMycobacterium tuberculosisPhenotypePregnancyProspective StudiesAntitubercular Agents

Identifiers

PMID32049255
PMCPMC7014566
OpenAlexW3005309601

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.