Evidence map›Paper›PMID 32048448›Full record

ArticleJournal of cellular and molecular medicine2020

STAT1 and its related molecules as potential biomarkers in Mycobacterium tuberculosis infection.

Xing-Hao Yi, Bo Zhang, Yu-Rong Fu, Zheng-Jun Yi

Open access · goldAbstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 1 synthesis or guideline pooled it, 69 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Exposure to Urban Air Pollution Particulate Matter Modifies Th1/Th2American journal of respiratory cell and molecular biology · 2025
    Article
  7. Article
  8. Article
  9. Article
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  13. Article
  14. High and Low Levels ofInternational journal of molecular sciences · 2023
    Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Circular RNAs: typical biomarkers for bone-related diseases.Journal of Zhejiang University. Science. B · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Xing-Hao YiKey Laboratory of Clinical Laboratory Diagnostics in Universities of Shandong, Department of Laboratory Medicine and clinical medical collegue, Weifang Medical University, Weifang, China.
Bo ZhangKey Laboratory of Clinical Laboratory Diagnostics in Universities of Shandong, Department of Laboratory Medicine and clinical medical collegue, Weifang Medical University, Weifang, China.
Yu-Rong FuKey Laboratory of Clinical Laboratory Diagnostics in Universities of Shandong, Department of Laboratory Medicine and clinical medical collegue, Weifang Medical University, Weifang, China.ORCID 0000-0001-9350-2453
Zheng-Jun YiKey Laboratory of Clinical Laboratory Diagnostics in Universities of Shandong, Department of Laboratory Medicine and clinical medical collegue, Weifang Medical University, Weifang, China.ORCID 0000-0003-4013-5084
Weifang Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tuberculosis (TB) is a severe infectious disease that seriously endangers human health. The immune defence mechanism of the body against TB is still unclear. The purpose of this study was to find the key molecules involved in the immune defence response during TB infection, and provide reference for the treatment of TB and further understanding of the immune defence mechanism of the body. Data from GSE83456 were downloaded from GEO data sets for analysis, and a total of 192 differentially expressed genes were screened out. Most of these genes are enriched in the interferon signalling pathway and are defence response-related. We also found that STAT1 plays an important role in the immune defence of TB infection and it is one of the key genes related to interferon signalling pathway. STAT1-related molecules including hsa-miR-448, hsa-miR-223-3p, SAMD8_hsa_circRNA 994 and TWF1_hsa_circRNA 9897 were therefore screened out. Furthermore, expression levels of hsa-miR-448 and hsa-miR-223-3p were then verified by qRT-PCR. Results showed that both hsa-miR-448 and hsa-miR-223-3p were down-regulated in plasma from patients with pulmonary TB. Taken together, our data indicate that an mRNA-miRNA-circRNA interaction chain may play an important role in the infection of MTB, and STAT1 and related molecules including hsa-miR-223-3p, has-miR-448, SAMD8_hsa_circRNA994 and TWF1_hsa_circRNA9897 were identified as potential biomarkers in the development of active TB.

Indexed as

BiomarkersDatabases, GeneticGene Expression ProfilingGene Expression RegulationGene OntologyGene Regulatory NetworksHumansInterferonsMicroRNAsMultigene FamilyProtein Interaction MapsReproducibility of ResultsRNA, CircularSignal TransductionSoftwareSTAT1 Transcription FactorBiomarkersInterferonsMicroRNAsRNA, CircularSTAT1 Transcription Factorbioinformatic analysisbiomarkerscircRNAmiRNAtuberculosis

Identifiers

PMID32048448
PMCPMC7077527
OpenAlexW3006293845

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.