Evidence map›Paper›PMID 32048094›Full record

ArticleJournal of plant research2020

TaABI5, a wheat homolog of Arabidopsis thaliana ABA insensitive 5, controls seed germination.

Shigeko Utsugi, Ikuo Ashikawa, Shingo Nakamura, Mineo Shibasaka

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of plant research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
5.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
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  8. Allelic variation of TaABI5-A4 significantly affects seed dormancy in bread wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  9. Review
  10. PeerJ · 2024
    Article
  11. Article
  12. Article
  13. Genome-Wide Identification and Analysis ofInternational journal of molecular sciences · 2022
    Article
  14. Review
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  16. Article
  17. Molecular mapping and characterization of QBp.caas-3BL for black point resistance in wheat (Triticum aestivum L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Shigeko UtsugiInstitute of Plant Science and Resources (IPSR), Okayama University, 2-20-1 Chuo, Kurashiki, Okayama, 710-0046, Japan. utsugi@rib.okayama-u.ac.jp.
Ikuo AshikawaInstitute of Crop Science, NARO, 2-1-2 Kannonndai, Tsukuba, Ibaraki, 305-8518, Japan.
Shingo NakamuraInstitute of Crop Science, NARO, 2-1-2 Kannonndai, Tsukuba, Ibaraki, 305-8518, Japan.
Mineo ShibasakaInstitute of Plant Science and Resources (IPSR), Okayama University, 2-20-1 Chuo, Kurashiki, Okayama, 710-0046, Japan.
Institute of Crop Science · JPOkayama University · JP

Funding

Ministry of Agriculture, Forestry and Fisheries Grant GD3007
6 · The paper itself

Abstract

Abscisic acid (ABA) response element (ABRE)-binding factors (ABFs) are basic region/leucine zipper motif (bZIP) transcription factors that regulate the expression of ABA-induced genes containing ABRE in their promoters. The amino acid sequence of the wheat bZIP protein, TaABI5, showed high homology to that of Arabidopsis ABA insensitive 5 (ABI5). TaABI5 was classified into the clade of ABI5s in Arabidopsis and rice, unlike TRAB1 of rice, Wabi5 of wheat, and HvABI5 of barley in the bZIP Group A family, by a phylogenetic analysis. TaABI5 was strongly expressed in seeds during the late ripening and maturing stages; however, its expression level markedly decreased after germination. An in situ hybridization analysis showed that TaABI5 mRNA accumulated in seed embryos, particularly the scutellum. In a transient assay using wheat aleurone cells, TaABI5 activated the promoter of Em containing ABRE, which is an embryogenesis abundant protein gene, indicating that TaABI5 acts as a transcription factor in wheat seeds. Furthermore, the seeds of transgenic Arabidopsis lines introduced with 35S:TaABI5 exhibited high sensitivity to ABA and the inhibition of germination. The seed dormancy of the transgenic Arabidopsis lines was stronger than that of Col. These results support TaABI5 playing an important role in mature seeds, particularly before seed germination, and acting as a functional ortholog to Arabidopsis ABI5.

Indexed as

GerminationAbscisic AcidArabidopsisArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsGene Expression Regulation, PlantPhylogenyPlants, Genetically ModifiedSeedsTriticumABI5 protein, ArabidopsisAbscisic AcidArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsAbscisic acid (ABA)Seed germinationTaABI5Triticum aestivum L

Identifiers

PMID32048094
OpenAlexW3006508262

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.