Evidence map›Paper›PMID 32047572›Full record

ArticleStatistics in biosciences2019

Organizing and analyzing the activity data in NHANES.

Andrew Leroux, Junrui Di, Ekaterina Smirnova, Elizabeth J Mcguffey, Quy Cao, Elham Bayatmokhtari, Lucia Tabacu, Vadim Zipunnikov, Jacek K Urbanek, Ciprian Crainiceanu

Open access · greenAbstract read
In one paragraph

Article in Statistics in biosciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 99 citations in OpenAlex.

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  6. Functional quantile principal component analysis.Biostatistics (Oxford, England) · 2025
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  18. Scalar-Function Causal Discovery for Generating Causal Hypotheses with Observational Wearable Device Data.Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Andrew LerouxDepartment of Biostatistics, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, USA.
Junrui DiDepartment of Biostatistics, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, USA.
Ekaterina SmirnovaDepartment of Biostatistics, Virginia Commonwealth University, Richmond, USA.
Elizabeth J McguffeyDepartment of Mathematics, United States Naval Academy, Annapolis, USA.
Quy CaoDepartment of Mathematical Sciences, University of Montana, Missoula, USA.
Elham BayatmokhtariDepartment of Mathematical Sciences, University of Montana, Missoula, USA.
Lucia TabacuDepartment of Mathematics and Statistics, Old Dominion University, Norfolk, USA.
Vadim ZipunnikovDepartment of Biostatistics, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, USA.
Jacek K UrbanekDivision of Geriatric Medicine and Gerontology, Department of Medicine, Center on Aging and Health, School of Medicine, Johns Hopkins University, Baltimore, USA.
Ciprian CrainiceanuDepartment of Biostatistics, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, USA.
Johns Hopkins University · USUniversity of Montana · USOld Dominion University · USUnited States Naval Academy · US

Funding

EPIDEMIOLOGY AND BIOSTATISTICS OF AGINGT32AG000247 · NIA · JOHNS HOPKINS UNIVERSITY · PI Karen J. Bandeen-Roche · 1996 to 2026
$13.2M
Statistical Methods for Multilevel Multivariate Functional StudiesR01NS060910 · NINDS · JOHNS HOPKINS UNIVERSITY · PI Ciprian M Crainiceanu · 2009 to 2026
$8.3M
Statistical methods for analyzing objectively measured physical activity dataR01HL130483 · NHLBI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Chongzhi Di · 2016 to 2026
$4.4M
Statistical methods for biosignals with varying domainsR01HL123407 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI CRAINICEANU, CIPRIAN M · 2014 to 2017
$1.6M
NHLBI NIH HHS R01 HL123407NHLBI NIH HHS R01 HL130483NIA NIH HHS T32 AG000247NINDS NIH HHS R01 NS060910
6 · The paper itself

Abstract

The NHANES study contains objectively measured physical activity data collected using hip-worn accelerometers from multiple cohorts. However, using the accelerometry data has proven daunting because: 1) currently, there are no agreed upon standard protocols for data storage and analysis; 2) data exhibit heterogeneous patterns of missingness due to varying degrees of adherence to wear-time protocols; 3) sampling weights need to be carefully adjusted and accounted for in individual analyses; 4) there is a lack of reproducible software that transforms the data from its published format into analytic form; and 5) the high dimensional nature of accelerometry data complicates analyses. Here, we provide a framework for processing, storing, and analyzing the NHANES accelerometry data for the 2003-2004 and 2005-2006 surveys. We also provide an NHANES data package in R, to help disseminate high quality, processed activity data combined with mortality and demographic information. Thus, we provide the tools to transition from "available data online" to "easily accessible and usable data", which substantially reduces the large upfront costs of initiating studies of association between physical activity and human health outcomes using NHANES. We apply these tools in an analysis showing that accelerometry features have the potential to predict 5-year all cause mortality better than known risk factors such as age, cigarette smoking, and various comorbidities.

Indexed as

AccelerometryNHANESPhyiscal ActivityPrediction

Identifiers

PMID32047572
PMCPMC7012355
OpenAlexW2914694758

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.