Evidence map›Paper›PMID 32046632›Full record

ArticleBMC genomics2020

Trait differentiation and modular toxin expression in palm-pitvipers.

Andrew J Mason, Mark J Margres, Jason L Strickland, Darin R Rokyta, Mahmood Sasa, Christopher L Parkinson

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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  12. Differences in PLAToxins · 2022
    Article
  13. Article
  14. Phylogenetically diverse diets favor more complex venoms in North American pitvipers.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  15. An ancient, conserved gene regulatory network led to the rise of oral venom systems.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Andrew J MasonDepartment of Biological Sciences, Clemson University, 190 Collings St., Clemson, SC, 29634, USA.
Mark J MargresDepartment of Biological Sciences, Clemson University, 190 Collings St., Clemson, SC, 29634, USA.
Jason L StricklandDepartment of Biological Sciences, Clemson University, 190 Collings St., Clemson, SC, 29634, USA.
Darin R RokytaDepartment of Biological Sciences, Florida State University, Tallahassee, FL, 24105, USA.
Mahmood SasaInstituto Clodomiro Picado, Facultad de Microbiologia, Universidad de Costa Rica, San Jose, Costa Rica.
Christopher L ParkinsonDepartment of Biological Sciences, Clemson University, 190 Collings St., Clemson, SC, 29634, USA. viper@clemson.edu.ORCID http://orcid.org/0000-0002-2020-6992
Clemson University · USFlorida State University · USUniversidad de Costa Rica · CR

Funding

American Museum of Natural History Theodore Roosevelt Memorial FundExplorers Club Student GrantNational Science Foundation DEB 1638879National Science Foundation DEB 1638902National Science Foundation DEB 1822417National Science Foundation DUE 1161228Southwestern Association of Naturalists McCarley Student Research Award
6 · The paper itself

Abstract

backgroundModularity is the tendency for systems to organize into semi-independent units and can be a key to the evolution and diversification of complex biological systems. Snake venoms are highly variable modular systems that exhibit extreme diversification even across very short time scales. One well-studied venom phenotype dichotomy is a trade-off between neurotoxicity versus hemotoxicity that occurs through the high expression of a heterodimeric neurotoxic phospholipase A

resultsWe assembled 1517 coding sequences, including 43 toxins for B. nigroviridis and 1787 coding sequences including 42 toxins for B. nubestris. The venom gland transcriptomes were extremely divergent between these two species with one B. nigroviridis exhibiting a primarily neurotoxic pattern of expression, both B. nubestris expressing primarily hemorrhagic toxins, and a second B. nigroviridis exhibiting a mixed expression phenotype. Weighted gene coexpression analyses identified six submodules of transcript expression variation, one of which was highly associated with SVMPs and a second which contained both subunits of the neurotoxic PLA

conclusionSub-modular regulation of expression likely contributes to the diversification of venom phenotypes within and among species and underscores the role of modularity in facilitating rapid evolution of complex traits.

Indexed as

AnimalsCrotalid VenomsCrotalinaeMultigene FamilyTranscriptomeCrotalid VenomsBothriechisGene family evolutionModularityTranscriptomicsVenom

Identifiers

PMID32046632
PMCPMC7014597
OpenAlexW3012685222

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.